Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ACEPM6_RS18620 Genome accession   NZ_CP169570
Coordinates   3697990..3698388 (-) Length   132 a.a.
NCBI ID   WP_022552569.1    Uniprot ID   -
Organism   Bacillus velezensis strain CIMT3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3692990..3703388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPM6_RS18595 (ACEPM6_18595) - 3693162..3694364 (+) 1203 WP_014416870.1 GTP-binding protein -
  ACEPM6_RS18600 (ACEPM6_18600) - 3694429..3695565 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  ACEPM6_RS18605 (ACEPM6_18605) - 3695580..3696014 (+) 435 WP_014416871.1 RDD family protein -
  ACEPM6_RS18610 (ACEPM6_18610) - 3696131..3696409 (+) 279 WP_263612330.1 YckD family protein -
  ACEPM6_RS18615 (ACEPM6_18615) - 3696513..3697949 (+) 1437 WP_022552568.1 glycoside hydrolase family 1 protein -
  ACEPM6_RS18620 (ACEPM6_18620) nin/comJ 3697990..3698388 (-) 399 WP_022552569.1 competence protein ComJ Regulator
  ACEPM6_RS18625 (ACEPM6_18625) nucA/comI 3698409..3698846 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACEPM6_RS18630 (ACEPM6_18630) hxlB 3699177..3699734 (-) 558 WP_014416874.1 6-phospho-3-hexuloisomerase -
  ACEPM6_RS18635 (ACEPM6_18635) hxlA 3699731..3700366 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  ACEPM6_RS18640 (ACEPM6_18640) - 3700598..3700960 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14897.88 Da        Isoelectric Point: 4.7846

>NTDB_id=1052360 ACEPM6_RS18620 WP_022552569.1 3697990..3698388(-) (nin/comJ) [Bacillus velezensis strain CIMT3]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVTSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1052360 ACEPM6_RS18620 WP_022552569.1 3697990..3698388(-) (nin/comJ) [Bacillus velezensis strain CIMT3]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTAACATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment