Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACE4RE_RS11080 Genome accession   NZ_OZ059822
Coordinates   2250635..2251786 (-) Length   383 a.a.
NCBI ID   WP_000020355.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate E9_23S01315-1     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 2245635..2256786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RE_RS11060 - 2246031..2246828 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  ACE4RE_RS11065 - 2247002..2247217 (+) 216 WP_000026308.1 hypothetical protein -
  ACE4RE_RS11070 rny 2247514..2249073 (-) 1560 WP_001050913.1 ribonuclease Y -
  ACE4RE_RS11075 recA 2249427..2250470 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ACE4RE_RS11080 cinA 2250635..2251786 (-) 1152 WP_000020355.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACE4RE_RS11085 pgsA 2252011..2252589 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACE4RE_RS11090 - 2252623..2253015 (-) 393 WP_000859443.1 RodZ family helix-turn-helix domain-containing protein -
  ACE4RE_RS11095 - 2253034..2253861 (-) 828 WP_000214890.1 YmfK family protein -
  ACE4RE_RS11100 ymfI 2253966..2254670 (-) 705 WP_000646222.1 elongation factor P 5-aminopentanone reductase -
  ACE4RE_RS11105 yfmH 2254670..2255956 (-) 1287 WP_000664762.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43166.44 Da        Isoelectric Point: 6.0928

>NTDB_id=1052203 ACE4RE_RS11080 WP_000020355.1 2250635..2251786(-) (cinA) [Staphylococcus aureus isolate E9_23S01315-1]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETVLIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKINEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNLEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1052203 ACE4RE_RS11080 WP_000020355.1 2250635..2251786(-) (cinA) [Staphylococcus aureus isolate E9_23S01315-1]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAATGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTA
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACACTCTGAACTATTAAGATTTGCTGGAATAGGTGA
ATCTAAAGTAGAAACAGTATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCAGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAGCAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTAATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTATTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
AGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTTATAA
GGTTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433