Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ACE1EH_RS14680 Genome accession   NZ_CP169535
Coordinates   3006964..3007608 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain HJ-16     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3001964..3012608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1EH_RS14645 (ACE1EH_14645) - 3003149..3003580 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  ACE1EH_RS14650 (ACE1EH_14650) - 3003580..3003921 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACE1EH_RS14655 (ACE1EH_14655) - 3003914..3005395 (+) 1482 WP_038459658.1 Na+/H+ antiporter subunit D -
  ACE1EH_RS14660 (ACE1EH_14660) - 3005401..3005877 (+) 477 WP_375004436.1 Na+/H+ antiporter subunit E -
  ACE1EH_RS14665 (ACE1EH_14665) - 3005877..3006161 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  ACE1EH_RS14670 (ACE1EH_14670) mnhG 3006145..3006519 (+) 375 WP_252052749.1 monovalent cation/H(+) antiporter subunit G -
  ACE1EH_RS14675 (ACE1EH_14675) - 3006559..3006942 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  ACE1EH_RS14680 (ACE1EH_14680) comA 3006964..3007608 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACE1EH_RS14685 (ACE1EH_14685) comP 3007689..3009977 (-) 2289 WP_375004437.1 histidine kinase Regulator
  ACE1EH_RS14690 (ACE1EH_14690) comX 3009989..3010153 (-) 165 WP_007613432.1 competence pheromone ComX -
  ACE1EH_RS14695 (ACE1EH_14695) - 3010153..3011064 (-) 912 WP_007613433.1 polyprenyl synthetase family protein -
  ACE1EH_RS14700 (ACE1EH_14700) degQ 3011216..3011356 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACE1EH_RS14705 (ACE1EH_14705) - 3011822..3012163 (+) 342 WP_375004438.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=1051890 ACE1EH_RS14680 WP_003152052.1 3006964..3007608(-) (comA) [Bacillus velezensis strain HJ-16]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1051890 ACE1EH_RS14680 WP_003152052.1 3006964..3007608(-) (comA) [Bacillus velezensis strain HJ-16]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGAACTGAAGCAGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment