Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACE1EH_RS02000 Genome accession   NZ_CP169535
Coordinates   392718..393671 (+) Length   317 a.a.
NCBI ID   WP_032872883.1    Uniprot ID   -
Organism   Bacillus velezensis strain HJ-16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 387718..398671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1EH_RS01975 (ACE1EH_01975) - 387763..389190 (+) 1428 WP_375004918.1 ATP-binding protein -
  ACE1EH_RS01980 (ACE1EH_01980) rapC 389349..390497 (+) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  ACE1EH_RS01985 (ACE1EH_01985) phrC 390481..390600 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACE1EH_RS01990 (ACE1EH_01990) - 390750..390860 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  ACE1EH_RS01995 (ACE1EH_01995) - 390940..392304 (-) 1365 WP_375004919.1 aspartate kinase -
  ACE1EH_RS02000 (ACE1EH_02000) ceuB 392718..393671 (+) 954 WP_032872883.1 ABC transporter permease Machinery gene
  ACE1EH_RS02005 (ACE1EH_02005) - 393661..394608 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  ACE1EH_RS02010 (ACE1EH_02010) - 394602..395360 (+) 759 WP_265973359.1 ABC transporter ATP-binding protein -
  ACE1EH_RS02015 (ACE1EH_02015) - 395382..396326 (+) 945 WP_007609406.1 siderophore ABC transporter substrate-binding protein -
  ACE1EH_RS02020 (ACE1EH_02020) - 396368..397792 (-) 1425 WP_375004920.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=1051841 ACE1EH_RS02000 WP_032872883.1 392718..393671(+) (ceuB) [Bacillus velezensis strain HJ-16]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1051841 ACE1EH_RS02000 WP_032872883.1 392718..393671(+) (ceuB) [Bacillus velezensis strain HJ-16]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGTTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCTAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment