Detailed information NTG1051839

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACE1EH_RS01980
• Genome accession: NZ_CP169535
• Coordinates: 389349..390497 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HJ-16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 384349..395497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE1EH_RS01960 (ACE1EH_01960)	-	384752..385435 (-)	684	WP_088461437.1	ABC transporter ATP-binding protein	-
ACE1EH_RS01965 (ACE1EH_01965)	-	385450..386880 (-)	1431	WP_375004917.1	ABC transporter permease	-
ACE1EH_RS01970 (ACE1EH_01970)	-	387093..387776 (+)	684	WP_007410267.1	response regulator transcription factor	-
ACE1EH_RS01975 (ACE1EH_01975)	-	387763..389190 (+)	1428	WP_375004918.1	ATP-binding protein	-
ACE1EH_RS01980 (ACE1EH_01980)	rapC	389349..390497 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
ACE1EH_RS01985 (ACE1EH_01985)	phrC	390481..390600 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACE1EH_RS01990 (ACE1EH_01990)	-	390750..390860 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
ACE1EH_RS01995 (ACE1EH_01995)	-	390940..392304 (-)	1365	WP_375004919.1	aspartate kinase	-
ACE1EH_RS02000 (ACE1EH_02000)	ceuB	392718..393671 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
ACE1EH_RS02005 (ACE1EH_02005)	-	393661..394608 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
ACE1EH_RS02010 (ACE1EH_02010)	-	394602..395360 (+)	759	WP_265973359.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=1051839 ACE1EH_RS01980 WP_029326229.1 389349..390497(+) (rapC) [Bacillus velezensis strain HJ-16]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1051839 ACE1EH_RS01980 WP_029326229.1 389349..390497(+) (rapC) [Bacillus velezensis strain HJ-16]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGTTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568