Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACEYZN_RS09570 | Genome accession | NZ_CP169375 |
| Coordinates | 2061513..2061893 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836912.1 | Uniprot ID | A0AAP1R0C8 |
| Organism | Acinetobacter baumannii strain H3 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2056513..2066893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEYZN_RS09540 (ACEYZN_09540) | tadA | 2056632..2057135 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ACEYZN_RS09545 (ACEYZN_09545) | - | 2057142..2058266 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACEYZN_RS09550 (ACEYZN_09550) | ung | 2058263..2058976 (-) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| ACEYZN_RS09555 (ACEYZN_09555) | - | 2059027..2059623 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ACEYZN_RS09560 (ACEYZN_09560) | gspK | 2059853..2060812 (-) | 960 | WP_057092779.1 | type II secretion system minor pseudopilin GspK | - |
| ACEYZN_RS09565 (ACEYZN_09565) | xcpW | 2060812..2061513 (-) | 702 | WP_000594582.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACEYZN_RS09570 (ACEYZN_09570) | xcpV | 2061513..2061893 (-) | 381 | WP_000836912.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACEYZN_RS09575 (ACEYZN_09575) | - | 2061883..2062437 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACEYZN_RS09580 (ACEYZN_09580) | - | 2062447..2063055 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACEYZN_RS09585 (ACEYZN_09585) | - | 2063093..2063866 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACEYZN_RS09590 (ACEYZN_09590) | - | 2063884..2064225 (-) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| ACEYZN_RS09595 (ACEYZN_09595) | - | 2064237..2065217 (-) | 981 | WP_057092777.1 | DNA polymerase III subunit delta' | - |
| ACEYZN_RS09600 (ACEYZN_09600) | kdsB | 2065229..2065990 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13965.16 Da Isoelectric Point: 9.8004
>NTDB_id=1051104 ACEYZN_RS09570 WP_000836912.1 2061513..2061893(-) (xcpV) [Acinetobacter baumannii strain H3]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYSVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1051104 ACEYZN_RS09570 WP_000836912.1 2061513..2061893(-) (xcpV) [Acinetobacter baumannii strain H3]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATTCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |