Detailed information NTG1051103

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACEYZN_RS09565
• Genome accession: NZ_CP169375
• Coordinates: 2060812..2061513 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594582.1
• Uniprot ID: A0AAX0TJI0
• Organism: Acinetobacter baumannii strain H3
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2055812..2066513

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEYZN_RS09535 (ACEYZN_09535)	-	2056119..2056562 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACEYZN_RS09540 (ACEYZN_09540)	tadA	2056632..2057135 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACEYZN_RS09545 (ACEYZN_09545)	-	2057142..2058266 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACEYZN_RS09550 (ACEYZN_09550)	ung	2058263..2058976 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
ACEYZN_RS09555 (ACEYZN_09555)	-	2059027..2059623 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ACEYZN_RS09560 (ACEYZN_09560)	gspK	2059853..2060812 (-)	960	WP_057092779.1	type II secretion system minor pseudopilin GspK	-
ACEYZN_RS09565 (ACEYZN_09565)	xcpW	2060812..2061513 (-)	702	WP_000594582.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACEYZN_RS09570 (ACEYZN_09570)	xcpV	2061513..2061893 (-)	381	WP_000836912.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACEYZN_RS09575 (ACEYZN_09575)	-	2061883..2062437 (-)	555	WP_000841373.1	type II secretion system protein	-
ACEYZN_RS09580 (ACEYZN_09580)	-	2062447..2063055 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACEYZN_RS09585 (ACEYZN_09585)	-	2063093..2063866 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACEYZN_RS09590 (ACEYZN_09590)	-	2063884..2064225 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
ACEYZN_RS09595 (ACEYZN_09595)	-	2064237..2065217 (-)	981	WP_057092777.1	DNA polymerase III subunit delta'	-
ACEYZN_RS09600 (ACEYZN_09600)	kdsB	2065229..2065990 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26577.60 Da
• Isoelectric Point: 9.5501

>NTDB_id=1051103 ACEYZN_RS09565 WP_000594582.1 2060812..2061513(-) (xcpW) [Acinetobacter baumannii strain H3]
MIKNKYIHIRSIASRLAARSSSARLARASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQIHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVIKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1051103 ACEYZN_RS09565 WP_000594582.1 2060812..2061513(-) (xcpW) [Acinetobacter baumannii strain H3]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAGCTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAAATTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCATAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987