Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACEWY3_RS09470 Genome accession   NZ_CP169265
Coordinates   1903956..1904942 (-) Length   328 a.a.
NCBI ID   WP_000959287.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CBC226     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1898956..1909942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEWY3_RS09445 (ACEWY3_09445) - 1899216..1899563 (-) 348 WP_001242102.1 hypothetical protein -
  ACEWY3_RS09450 (ACEWY3_09450) - 1899749..1900342 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  ACEWY3_RS09455 (ACEWY3_09455) - 1900446..1900811 (+) 366 WP_000214065.1 truncated hemoglobin YjbI -
  ACEWY3_RS09460 (ACEWY3_09460) yjbH 1900834..1901640 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACEWY3_RS09465 (ACEWY3_09465) pepF 1902100..1903908 (-) 1809 WP_000082731.1 oligoendopeptidase F -
  ACEWY3_RS09470 (ACEWY3_09470) coiA 1903956..1904942 (-) 987 WP_000959287.1 competence protein CoiA Machinery gene
  ACEWY3_RS09475 (ACEWY3_09475) mecA 1905063..1905782 (-) 720 WP_001217730.1 adaptor protein MecA -
  ACEWY3_RS09480 (ACEWY3_09480) spxA 1906153..1906548 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACEWY3_RS09485 (ACEWY3_09485) trpS 1906843..1907832 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACEWY3_RS09490 (ACEWY3_09490) opp4C 1907874..1908755 (-) 882 WP_001180262.1 oligopeptide ABC transporter permease -
  ACEWY3_RS09495 (ACEWY3_09495) opp4B 1908767..1909729 (-) 963 WP_000593417.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38840.52 Da        Isoelectric Point: 9.7121

>NTDB_id=1050092 ACEWY3_RS09470 WP_000959287.1 1903956..1904942(-) (coiA) [Staphylococcus aureus strain CBC226]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDK
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1050092 ACEWY3_RS09470 WP_000959287.1 1903956..1904942(-) (coiA) [Staphylococcus aureus strain CBC226]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTATTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAAA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

99.085

100

0.991

  coiA Staphylococcus aureus N315

97.866

100

0.979


Multiple sequence alignment