Detailed information NTG1049894

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABGU48_RS22965
• Genome accession: NZ_OZ040192
• Coordinates: 4745687..4746712 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate 30859_5#32
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4740687..4751712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGU48_RS22945	metJ	4741872..4742189 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABGU48_RS22950	yiiX	4742249..4742857 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABGU48_RS22955	rpmE	4742918..4743130 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABGU48_RS22960	priA	4743333..4745531 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABGU48_RS22965	cytR	4745687..4746712 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABGU48_RS22970	ftsN	4746804..4747763 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABGU48_RS22975	hslV	4747856..4748386 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABGU48_RS22980	hslU	4748396..4749727 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABGU48_RS22985	menA	4749794..4750720 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABGU48_RS22990	rraA	4750813..4751298 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABGU48_RS22995	zapB	4751383..4751628 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1049894 ABGU48_RS22965 WP_000644908.1 4745687..4746712(+) (cytR) [Escherichia coli isolate 30859_5#32]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1049894 ABGU48_RS22965 WP_000644908.1 4745687..4746712(+) (cytR) [Escherichia coli isolate 30859_5#32]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625