Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ACETWW_RS01800 Genome accession   NZ_CP169072
Coordinates   334806..335204 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain T971     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 329806..340204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACETWW_RS01775 (ACETWW_01775) - 329978..331180 (+) 1203 WP_069007411.1 GTP-binding protein -
  ACETWW_RS01780 (ACETWW_01780) - 331245..332381 (+) 1137 WP_374004749.1 zinc-dependent alcohol dehydrogenase -
  ACETWW_RS01785 (ACETWW_01785) - 332396..332830 (+) 435 WP_007409358.1 RDD family protein -
  ACETWW_RS01790 (ACETWW_01790) - 332947..333225 (+) 279 WP_263612330.1 YckD family protein -
  ACETWW_RS01795 (ACETWW_01795) - 333329..334765 (+) 1437 WP_025284208.1 glycoside hydrolase family 1 protein -
  ACETWW_RS01800 (ACETWW_01800) nin/comJ 334806..335204 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  ACETWW_RS01805 (ACETWW_01805) nucA/comI 335225..335662 (-) 438 WP_132106741.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACETWW_RS01810 (ACETWW_01810) hxlB 336019..336576 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  ACETWW_RS01815 (ACETWW_01815) hxlA 336573..337208 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  ACETWW_RS01820 (ACETWW_01820) - 337440..337802 (+) 363 WP_012116770.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=1049705 ACETWW_RS01800 WP_014416873.1 334806..335204(-) (nin/comJ) [Bacillus velezensis strain T971]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1049705 ACETWW_RS01800 WP_014416873.1 334806..335204(-) (nin/comJ) [Bacillus velezensis strain T971]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment