Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | ACEUKD_RS12215 | Genome accession | NZ_CP169050 |
| Coordinates | 2636462..2637076 (+) | Length | 204 a.a. |
| NCBI ID | WP_031780576.1 | Uniprot ID | A0A0T7EDM0 |
| Organism | Vibrio diabolicus strain SF42 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2631462..2642076
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEUKD_RS12195 (ACEUKD_12195) | - | 2631748..2632665 (-) | 918 | WP_258662982.1 | ABC transporter ATP-binding protein | - |
| ACEUKD_RS12200 (ACEUKD_12200) | - | 2632918..2634588 (-) | 1671 | WP_046875129.1 | SulP family inorganic anion transporter | - |
| ACEUKD_RS12205 (ACEUKD_12205) | can | 2634866..2635534 (+) | 669 | WP_005379996.1 | carbonate dehydratase | - |
| ACEUKD_RS12210 (ACEUKD_12210) | hpt | 2635613..2636143 (-) | 531 | WP_005379995.1 | hypoxanthine phosphoribosyltransferase | - |
| ACEUKD_RS12215 (ACEUKD_12215) | opaR | 2636462..2637076 (+) | 615 | WP_031780576.1 | transcriptional regulator OpaR | Regulator |
| ACEUKD_RS12220 (ACEUKD_12220) | lpdA | 2637222..2638649 (-) | 1428 | WP_374092617.1 | dihydrolipoyl dehydrogenase | - |
| ACEUKD_RS12225 (ACEUKD_12225) | aceF | 2638917..2640812 (-) | 1896 | WP_374092618.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23612.89 Da Isoelectric Point: 6.4042
>NTDB_id=1049548 ACEUKD_RS12215 WP_031780576.1 2636462..2637076(+) (opaR) [Vibrio diabolicus strain SF42]
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKSEAELKHLVSSYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=1049548 ACEUKD_RS12215 WP_031780576.1 2636462..2637076(+) (opaR) [Vibrio diabolicus strain SF42]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCAGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTAGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCACGTGAAAACATCGCCAATATTACTAATGCAATGATCGAGCTTGTCAGTCAAGA
CTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGTGCTTCAACACGTGACGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTAGTACAAAACATGTTCATTAAAGCGATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCCCCGATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTGTTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCAGATATCGCAGAAATTGCTCAAGTTTCTGTGGCGACCGTTT
TTAACTACTTCCCGACTCGTGAAGACTTAGTGGATGAAGTACTCAACCACGTCGTACGTCAGTTCTCGAACTTCCTATCG
GATAACATTGACTTAGACTTACACGCACGTGAAAACATCGCCAATATTACTAATGCAATGATCGAGCTTGTCAGTCAAGA
CTGTCACTGGCTAAAAGTTTGGTTCGAGTGGAGTGCTTCAACACGTGACGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTAGTACAAAACATGTTCATTAAAGCGATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACTTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGTGCAAAAAGTGAAGCGGAACTTAA
GCACCTTGTTAGTTCATACTTAGACATGCTTTGCATTTACAACCGTGAACACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
97.059 |
100 |
0.971 |
| hapR | Vibrio cholerae C6706 |
73.232 |
97.059 |
0.711 |
| hapR | Vibrio cholerae strain A1552 |
73.232 |
97.059 |
0.711 |