Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACEQ85_RS17860 | Genome accession | NZ_CP168966 |
| Coordinates | 3726082..3726462 (-) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain LS-AP | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3721082..3731462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEQ85_RS17830 (ACEQ85_17830) | tadA | 3721198..3721701 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| ACEQ85_RS17835 (ACEQ85_17835) | hibch | 3721707..3722831 (-) | 1125 | WP_014206599.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACEQ85_RS17840 (ACEQ85_17840) | ung | 3722828..3723541 (-) | 714 | WP_017399503.1 | uracil-DNA glycosylase | - |
| ACEQ85_RS17845 (ACEQ85_17845) | - | 3723595..3724191 (-) | 597 | WP_002121363.1 | 6-carboxytetrahydropterin synthase | - |
| ACEQ85_RS17850 (ACEQ85_17850) | gspK | 3724421..3725380 (-) | 960 | WP_342370538.1 | type II secretion system minor pseudopilin GspK | - |
| ACEQ85_RS17855 (ACEQ85_17855) | xcpW | 3725381..3726082 (-) | 702 | WP_342370539.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACEQ85_RS17860 (ACEQ85_17860) | xcpV | 3726082..3726462 (-) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACEQ85_RS17865 (ACEQ85_17865) | - | 3726452..3727006 (-) | 555 | WP_068527582.1 | type II secretion system protein | - |
| ACEQ85_RS17870 (ACEQ85_17870) | - | 3727013..3727621 (-) | 609 | WP_057085321.1 | TetR/AcrR family transcriptional regulator | - |
| ACEQ85_RS17875 (ACEQ85_17875) | ycfH | 3727658..3728431 (-) | 774 | WP_206217716.1 | TatD family hydrolase | - |
| ACEQ85_RS17880 (ACEQ85_17880) | pilZ | 3728449..3728790 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| ACEQ85_RS17885 (ACEQ85_17885) | holB | 3728801..3729781 (-) | 981 | WP_017482275.1 | DNA polymerase III subunit delta' | - |
| ACEQ85_RS17890 (ACEQ85_17890) | kdsB | 3729795..3730556 (-) | 762 | WP_069035664.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=1049003 ACEQ85_RS17860 WP_002121425.1 3726082..3726462(-) (xcpV) [Acinetobacter pittii strain LS-AP]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1049003 ACEQ85_RS17860 WP_002121425.1 3726082..3726462(-) (xcpV) [Acinetobacter pittii strain LS-AP]
ATGAAATCTAAAGGCTTCACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTCACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |