Detailed information NTG1049002

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACEQ85_RS17855
• Genome accession: NZ_CP168966
• Coordinates: 3725381..3726082 (-)
• Length: 233 a.a.
• NCBI ID: WP_342370539.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain LS-AP
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3720381..3731082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEQ85_RS17825 (ACEQ85_17825)	-	3720687..3721127 (-)	441	WP_014206600.1	SRPBCC family protein	-
ACEQ85_RS17830 (ACEQ85_17830)	tadA	3721198..3721701 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
ACEQ85_RS17835 (ACEQ85_17835)	hibch	3721707..3722831 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
ACEQ85_RS17840 (ACEQ85_17840)	ung	3722828..3723541 (-)	714	WP_017399503.1	uracil-DNA glycosylase	-
ACEQ85_RS17845 (ACEQ85_17845)	-	3723595..3724191 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
ACEQ85_RS17850 (ACEQ85_17850)	gspK	3724421..3725380 (-)	960	WP_342370538.1	type II secretion system minor pseudopilin GspK	-
ACEQ85_RS17855 (ACEQ85_17855)	xcpW	3725381..3726082 (-)	702	WP_342370539.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACEQ85_RS17860 (ACEQ85_17860)	xcpV	3726082..3726462 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACEQ85_RS17865 (ACEQ85_17865)	-	3726452..3727006 (-)	555	WP_068527582.1	type II secretion system protein	-
ACEQ85_RS17870 (ACEQ85_17870)	-	3727013..3727621 (-)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
ACEQ85_RS17875 (ACEQ85_17875)	ycfH	3727658..3728431 (-)	774	WP_206217716.1	TatD family hydrolase	-
ACEQ85_RS17880 (ACEQ85_17880)	pilZ	3728449..3728790 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
ACEQ85_RS17885 (ACEQ85_17885)	holB	3728801..3729781 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
ACEQ85_RS17890 (ACEQ85_17890)	kdsB	3729795..3730556 (-)	762	WP_069035664.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26563.50 Da
• Isoelectric Point: 10.0406

>NTDB_id=1049002 ACEQ85_RS17855 WP_342370539.1 3725381..3726082(-) (xcpW) [Acinetobacter pittii strain LS-AP]
MIKNKSFRSPSSASRLAVRSSSARLTRASGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQ
VLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLS
STLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 702 bp

>NTDB_id=1049002 ACEQ85_RS17855 WP_342370539.1 3725381..3726082(-) (xcpW) [Acinetobacter pittii strain LS-AP]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCCCGTCTTGCGGTACGATCAAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTT
TTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAA
GTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAA
TCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATC
GGTATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAGCCCTTATCA
AGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAA
TATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTT
ATGAGTGGATTTATAGCTTAAACCAAGGGGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	87.931	99.571	0.876