Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACERHT_RS13615 Genome accession   NZ_CP168930
Coordinates   2757094..2757699 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain SA114     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2752094..2762699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACERHT_RS13600 (ACERHT_13600) helD 2752311..2754365 (-) 2055 WP_001529137.1 DNA helicase IV -
  ACERHT_RS13605 (ACERHT_13605) - 2754489..2754935 (+) 447 WP_001261222.1 YccF domain-containing protein -
  ACERHT_RS13610 (ACERHT_13610) yccS 2754954..2757107 (+) 2154 WP_000950879.1 YccS family putative transporter -
  ACERHT_RS13615 (ACERHT_13615) sxy/tfoX 2757094..2757699 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACERHT_RS13620 (ACERHT_13620) sulA 2757916..2758425 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  ACERHT_RS13625 (ACERHT_13625) ompA 2758782..2759834 (+) 1053 WP_001562588.1 porin OmpA -
  ACERHT_RS13630 (ACERHT_13630) matP 2759906..2760358 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACERHT_RS13635 (ACERHT_13635) - 2760544..2762304 (+) 1761 WP_000156458.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1048818 ACERHT_RS13615 WP_001202375.1 2757094..2757699(-) (sxy/tfoX) [Salmonella enterica strain SA114]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1048818 ACERHT_RS13615 WP_001202375.1 2757094..2757699(-) (sxy/tfoX) [Salmonella enterica strain SA114]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACAGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751

Multiple sequence alignment