Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8614_RS05550 | Genome accession | NZ_AP028361 |
| Coordinates | 1066721..1067023 (+) | Length | 100 a.a. |
| NCBI ID | WP_032582988.1 | Uniprot ID | A0A5Y9CSD3 |
| Organism | Campylobacter jejuni strain BCH-10605 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1061721..1072023
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8614_RS05525 (B10605_10840) | rpsR | 1062081..1062341 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8614_RS05530 (B10605_10850) | lon | 1062401..1064776 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8614_RS05535 (B10605_10860) | - | 1064793..1065440 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8614_RS05540 (B10605_10870) | fliW | 1065601..1065990 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8614_RS05545 (B10605_10880) | proC | 1065990..1066724 (+) | 735 | WP_032582987.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8614_RS05550 (B10605_10890) | ctsT | 1066721..1067023 (+) | 303 | WP_032582988.1 | transformation system protein | Machinery gene |
| R8614_RS05555 (B10605_10900) | - | 1067020..1067682 (+) | 663 | WP_052778507.1 | hypothetical protein | - |
| R8614_RS05560 (B10605_10910) | - | 1067679..1068131 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8614_RS05565 (B10605_10920) | hemD | 1068128..1068757 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8614_RS05570 (B10605_10930) | thiE | 1068735..1069367 (-) | 633 | WP_052778506.1 | thiamine phosphate synthase | - |
| R8614_RS05575 (B10605_10940) | thiD | 1069357..1070169 (-) | 813 | WP_052778523.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8614_RS05580 (B10605_10950) | - | 1070166..1070852 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8614_RS05585 (B10605_10960) | - | 1070849..1071610 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=104806 R8614_RS05550 WP_032582988.1 1066721..1067023(+) (ctsT) [Campylobacter jejuni strain BCH-10605]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104806 R8614_RS05550 WP_032582988.1 1066721..1067023(+) (ctsT) [Campylobacter jejuni strain BCH-10605]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |