Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8564_RS08330 | Genome accession | NZ_AP028359 |
| Coordinates | 1584333..1584941 (-) | Length | 202 a.a. |
| NCBI ID | WP_002851464.1 | Uniprot ID | A0AB36GA54 |
| Organism | Campylobacter jejuni strain BCH-10570 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1579333..1589941
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8564_RS08305 (B10570_16630) | - | 1579490..1580254 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| R8564_RS08310 (B10570_16640) | - | 1580258..1581028 (+) | 771 | WP_002873601.1 | TSUP family transporter | - |
| R8564_RS08315 (B10570_16650) | ctsF | 1581015..1582196 (-) | 1182 | WP_002901002.1 | type II secretion system F family protein | Machinery gene |
| R8564_RS08320 (B10570_16660) | ctsE | 1582193..1583752 (-) | 1560 | WP_043011746.1 | GspE/PulE family protein | Machinery gene |
| R8564_RS08325 (B10570_16670) | ctsX | 1583742..1584329 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| R8564_RS08330 (B10570_16680) | ctsP | 1584333..1584941 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R8564_RS08335 (B10570_16690) | ctsD | 1584934..1586346 (-) | 1413 | WP_002855316.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8564_RS08340 (B10570_16700) | ctsR | 1586324..1586635 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23742.78 Da Isoelectric Point: 9.9955
>NTDB_id=104766 R8564_RS08330 WP_002851464.1 1584333..1584941(-) (ctsP) [Campylobacter jejuni strain BCH-10570]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=104766 R8564_RS08330 WP_002851464.1 1584333..1584941(-) (ctsP) [Campylobacter jejuni strain BCH-10570]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
99.505 |
100 |
0.995 |