Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   U8955_RS10135 Genome accession   NZ_OY769914
Coordinates   2018713..40 (+) Length   66 a.a.
NCBI ID   WP_416222851.1    Uniprot ID   -
Organism   Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2013713..5040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - htrA 2018713..40 (+) -2018672 - - Regulator

Sequence

Protein


Download         Length: 66 a.a.        Molecular weight: 7318.72 Da        Isoelectric Point: 10.5781

>NTDB_id=1047572 U8955_RS10135 WP_416222851.1 2018713..40(+) (htrA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MKHLQTFYKKGVTFLIIILIGFLSGALGSFVTLQLYQKQGNQATNNTTNTVTHPTVIIFIFILLF

Nucleotide


Download         Length: 0 bp        

>NTDB_id=1047572 U8955_RS10135 WP_416222851.1 2018713..40(+) (htrA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

54.717

81.538

0.446
  htrA Streptococcus pneumoniae Rx1

63.158

58.462

0.369
  htrA Streptococcus pneumoniae D39

63.158

58.462

0.369
  htrA Streptococcus pneumoniae R6

63.158

58.462

0.369
  htrA Streptococcus pneumoniae TIGR4

63.158

58.462

0.369