Detailed information NTG0104615

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: R8612_RS01840
• Genome accession: NZ_AP028351
• Coordinates: 374688..375869 (+)
• Length: 393 a.a.
• NCBI ID: WP_002787827.1
• Uniprot ID: -
• Organism: Campylobacter coli strain BCH-10460
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 369688..380869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8612_RS01825 (B10460_03560)	cysC	370362..370946 (+)	585	WP_002834054.1	adenylyl-sulfate kinase	-
R8612_RS01830 (B10460_03570)	-	370943..372628 (+)	1686	WP_220525014.1	hypothetical protein	-
R8612_RS01835 (B10460_03580)	-	372664..374691 (+)	2028	WP_052778836.1	capsular polysaccharide biosynthesis protein	-
R8612_RS01840 (B10460_03590)	kpsS	374688..375869 (+)	1182	WP_002787827.1	capsule biosynthesis protein	Regulator
R8612_RS01845 (B10460_03600)	-	375940..377061 (+)	1122	WP_002787825.1	hypothetical protein	-
R8612_RS01850 (B10460_03610)	-	377058..378428 (+)	1371	WP_057034390.1	cytochrome P450	-
R8612_RS01855 (B10460_03620)	-	378425..378847 (+)	423	WP_002783824.1	hypothetical protein	-
R8612_RS01860 (B10460_03630)	acpS	378850..379197 (-)	348	WP_002779165.1	holo-ACP synthase	-
R8612_RS01865 (B10460_03640)	fliL	379197..379733 (-)	537	WP_002779164.1	flagellar basal body-associated protein FliL	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 46439.14 Da
• Isoelectric Point: 9.9585

>NTDB_id=104615 R8612_RS01840 WP_002787827.1 374688..375869(+) (kpsS) [Campylobacter coli strain BCH-10460]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYESFFKEKKI
DAIVMYNDCRLIHAKAIKVAKGLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKYH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRIFYVHDTYLPTLLKNALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide

• Length: 1182 bp

>NTDB_id=104615 R8612_RS01840 WP_002787827.1 374688..375869(+) (kpsS) [Campylobacter coli strain BCH-10460]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGGACTTTTTT
TCACCGCCTTGCCATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTTTATGAGAGCTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGGGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTATTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGTACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGTCAAAAATACCATGTAG
AAGGAAGAATTTTCTATGTACATGATACTTATTTGCCTACTCTTTTAAAAAATGCTTTAGGTTGTATTACGATCAATTCT
ACAGTAGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGAAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCTAAAAAACTCCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAGTTCAATGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (81-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	87.5	99.746	0.873