Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D712_RS10805 | Genome accession | NZ_CP168754 |
| Coordinates | 2172623..2173018 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain D712 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2167623..2178018
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D712_RS10780 (D712_010780) | thiE | 2168222..2168863 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| D712_RS10785 (D712_010785) | thiM | 2168865..2169656 (-) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| D712_RS10790 (D712_010790) | thiD | 2169640..2170470 (-) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| D712_RS10795 (D712_010795) | tenA | 2170463..2171152 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| D712_RS10800 (D712_010800) | sceD | 2171539..2172234 (-) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| D712_RS10805 (D712_010805) | ssb | 2172623..2173018 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| D712_RS10810 (D712_010810) | - | 2173212..2173652 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| D712_RS10815 (D712_010815) | fabZ | 2173711..2174151 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| D712_RS10820 (D712_010820) | murA | 2174185..2175450 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| D712_RS10825 (D712_010825) | - | 2175561..2175794 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| D712_RS10830 (D712_010830) | - | 2175926..2176018 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| D712_RS10835 (D712_010835) | - | 2176356..2176760 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1045539 D712_RS10805 WP_000932694.1 2172623..2173018(-) (ssb) [Staphylococcus aureus strain D712]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1045539 D712_RS10805 WP_000932694.1 2172623..2173018(-) (ssb) [Staphylococcus aureus strain D712]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |