Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACEN40_RS04700 | Genome accession | NZ_CP168724 |
| Coordinates | 911301..911618 (-) | Length | 105 a.a. |
| NCBI ID | WP_193699218.1 | Uniprot ID | - |
| Organism | Campylobacter bilis strain 64 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 906301..916618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN40_RS04670 (ACEN40_04670) | - | 907476..908162 (+) | 687 | WP_203121189.1 | 3-methyladenine DNA glycosylase | - |
| ACEN40_RS04675 (ACEN40_04675) | thiD | 908159..908968 (+) | 810 | WP_158334542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACEN40_RS04680 (ACEN40_04680) | thiE | 908958..909590 (+) | 633 | WP_158334543.1 | thiamine phosphate synthase | - |
| ACEN40_RS04685 (ACEN40_04685) | - | 909568..910197 (+) | 630 | WP_158334594.1 | uroporphyrinogen-III synthase | - |
| ACEN40_RS04690 (ACEN40_04690) | - | 910194..910645 (-) | 452 | Protein_906 | hypothetical protein | - |
| ACEN40_RS04695 (ACEN40_04695) | - | 910642..911304 (-) | 663 | WP_158334545.1 | hypothetical protein | - |
| ACEN40_RS04700 (ACEN40_04700) | ctsT | 911301..911618 (-) | 318 | WP_193699218.1 | hypothetical protein | Machinery gene |
| ACEN40_RS04705 (ACEN40_04705) | proC | 911599..912330 (-) | 732 | WP_158334595.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACEN40_RS04710 (ACEN40_04710) | fliW | 912330..912719 (-) | 390 | WP_158334546.1 | flagellar assembly protein FliW | - |
| ACEN40_RS04715 (ACEN40_04715) | bamD | 912886..913533 (+) | 648 | WP_158334547.1 | outer membrane protein assembly factor BamD | - |
| ACEN40_RS04720 (ACEN40_04720) | lon | 913551..915929 (+) | 2379 | WP_158334548.1 | endopeptidase La | - |
| ACEN40_RS04725 (ACEN40_04725) | rpsR | 915980..916240 (-) | 261 | WP_158334549.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 12945.86 Da Isoelectric Point: 8.3968
>NTDB_id=1045289 ACEN40_RS04700 WP_193699218.1 911301..911618(-) (ctsT) [Campylobacter bilis strain 64]
MLAILNEKSLYIYRINPCYDNPIFNFCWHYLYYTHLYKNHENLNIIERLYKLQDRLYEKASLKTTLIQSSNLQPINLQEQ
IVKDGAFEFKKLYFQNQNYNVYFKE
MLAILNEKSLYIYRINPCYDNPIFNFCWHYLYYTHLYKNHENLNIIERLYKLQDRLYEKASLKTTLIQSSNLQPINLQEQ
IVKDGAFEFKKLYFQNQNYNVYFKE
Nucleotide
Download Length: 318 bp
>NTDB_id=1045289 ACEN40_RS04700 WP_193699218.1 911301..911618(-) (ctsT) [Campylobacter bilis strain 64]
GTGCTAGCAATACTAAATGAAAAAAGCCTTTATATTTATAGAATTAATCCATGCTATGATAATCCTATCTTTAATTTTTG
TTGGCATTATTTATATTATACTCATCTTTATAAAAACCACGAGAATTTAAACATTATTGAAAGACTTTACAAACTTCAAG
ATCGATTATACGAAAAAGCAAGTTTAAAAACCACCCTAATACAAAGCTCAAATTTACAGCCCATAAACCTACAAGAACAA
ATTGTCAAAGATGGTGCATTTGAATTTAAAAAACTATACTTTCAAAATCAAAACTACAATGTTTACTTCAAAGAATGA
GTGCTAGCAATACTAAATGAAAAAAGCCTTTATATTTATAGAATTAATCCATGCTATGATAATCCTATCTTTAATTTTTG
TTGGCATTATTTATATTATACTCATCTTTATAAAAACCACGAGAATTTAAACATTATTGAAAGACTTTACAAACTTCAAG
ATCGATTATACGAAAAAGCAAGTTTAAAAACCACCCTAATACAAAGCTCAAATTTACAGCCCATAAACCTACAAGAACAA
ATTGTCAAAGATGGTGCATTTGAATTTAAAAAACTATACTTTCAAAATCAAAACTACAATGTTTACTTCAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
66.25 |
76.19 |
0.505 |