Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACEPSP_RS06000 Genome accession   NZ_CP168695
Coordinates   1296454..1297731 (+) Length   425 a.a.
NCBI ID   WP_395323103.1    Uniprot ID   -
Organism   Levilactobacillus parabrevis strain FUA 30079     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1291454..1302731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPSP_RS05970 tsf 1291871..1292755 (+) 885 WP_020088595.1 translation elongation factor Ts -
  ACEPSP_RS05975 pyrH 1292901..1293623 (+) 723 WP_020088594.1 UMP kinase -
  ACEPSP_RS05980 frr 1293626..1294183 (+) 558 WP_020088593.1 ribosome recycling factor -
  ACEPSP_RS05985 - 1294210..1294632 (+) 423 WP_020088592.1 hypothetical protein -
  ACEPSP_RS05990 - 1294747..1295544 (+) 798 WP_395323613.1 isoprenyl transferase -
  ACEPSP_RS05995 - 1295566..1296354 (+) 789 WP_020088590.1 phosphatidate cytidylyltransferase -
  ACEPSP_RS06000 eeP 1296454..1297731 (+) 1278 WP_395323103.1 RIP metalloprotease RseP Regulator
  ACEPSP_RS06005 - 1297768..1299480 (+) 1713 WP_395323104.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46198.60 Da        Isoelectric Point: 9.3457

>NTDB_id=1045057 ACEPSP_RS06000 WP_395323103.1 1296454..1297731(+) (eeP) [Levilactobacillus parabrevis strain FUA 30079]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLFYRRGKDGTTYTVRLLPVGGYVRMAGAEDDEDEIK
PGTPVSLYLGKDDQVERINASKKSTLFNGIPVEITGSDLEDELWIEGYENGDESEVKRYPVAHNATIIETDGTELQIAPK
DVQFQAASLGRRLMTNFAGPMNNIILAIVTFMLMSFVQGGVAMGTNQIQVASSPVSIAKKAGIQNNDKILSVNGKQTKDW
TSLSTAIQPRANKATKVVIQRGSTQKTLTLTPKGEQSNGKTVGMIGITQAQNKHIGAILASGFTQTWTMTKALFGALWSM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLIPIPALDGGKILLNFIEAIRRKPLSENVEAGIT
LVGVGFLVILMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1045057 ACEPSP_RS06000 WP_395323103.1 1296454..1297731(+) (eeP) [Levilactobacillus parabrevis strain FUA 30079]
GTGATTACAACGATTATTACCTTTATTATCGTCTTTGGGATTCTGGTCATCGTTCACGAATTTGGGCATTTTTACTTTGC
CAAACGTGGTGGGATCTTGGTCCGAGAATTTTCTATTGGGATGGGTCCCAAGTTGTTTTACCGGCGCGGGAAGGATGGGA
CGACCTATACTGTCCGTCTATTACCCGTCGGGGGGTACGTCCGCATGGCGGGTGCCGAGGACGACGAAGATGAAATTAAG
CCCGGGACACCGGTCAGCCTGTACTTAGGCAAGGATGATCAGGTCGAACGGATCAATGCTAGCAAAAAGTCGACGTTGTT
TAACGGGATTCCAGTCGAAATCACCGGCTCTGATCTGGAGGATGAGCTCTGGATCGAGGGTTATGAAAATGGTGATGAGT
CTGAGGTCAAGCGTTACCCGGTCGCGCACAATGCGACCATTATTGAGACCGATGGTACCGAGCTGCAGATTGCGCCTAAG
GATGTGCAATTCCAAGCAGCTTCGTTAGGTCGGCGCCTCATGACCAACTTCGCCGGGCCGATGAACAACATCATCTTGGC
TATCGTGACGTTCATGCTGATGTCGTTTGTGCAAGGCGGGGTCGCCATGGGGACCAACCAAATCCAAGTGGCAAGTTCAC
CGGTGTCCATCGCCAAGAAGGCTGGTATCCAGAACAATGACAAGATCCTGTCCGTGAATGGCAAGCAGACCAAGGACTGG
ACATCATTGAGTACGGCCATTCAACCGCGGGCCAACAAGGCCACCAAGGTTGTCATTCAACGCGGTAGCACGCAGAAAAC
GCTGACGTTGACACCAAAGGGCGAGCAGTCCAACGGTAAAACGGTTGGGATGATTGGGATTACCCAGGCACAGAACAAGC
ATATCGGGGCCATTTTGGCTTCCGGGTTCACACAGACCTGGACGATGACCAAGGCGCTCTTTGGGGCGCTCTGGAGTATG
GTCTCCGGTCACTTTAGTCTGAACGATTTGGGTGGGCCAGTTGCGATCTTTGCAACGACCTCTCAAGCCACTAAATTTGG
CCTGGTCGGCGTGTTGAACTTCCTGGCTTTCTTGTCGATCAACTTGGCAATTGTCAATTTAATACCAATTCCTGCCTTAG
ATGGTGGTAAAATATTATTGAACTTTATTGAAGCTATCCGGCGCAAGCCCCTTTCCGAAAACGTGGAAGCGGGGATCACG
CTGGTCGGTGTCGGCTTCCTGGTGATTCTGATGTTACTGGTGACCTGGAACGATATCGAACGCTACTTTATTCACTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-410)

PDZ domain (PDZ_6)

(214-261)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.882

100

0.499
  eeP Streptococcus thermophilus LMG 18311

49.882

100

0.499

Multiple sequence alignment