Detailed information NTG1044902

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QOY19_RS10345
• Genome accession: NZ_OX595791
• Coordinates: 2040389..2041498 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae isolate MRI Z2-270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2035389..2046498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOY19_RS10320	-	2035761..2036600 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
QOY19_RS10325	pgsA	2036600..2037142 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QOY19_RS10330	-	2037265..2038548 (-)	1284	WP_000217765.1	pitrilysin family protein	-
QOY19_RS10335	-	2038550..2039794 (-)	1245	WP_000706190.1	pitrilysin family protein	-
QOY19_RS10340	yaaA	2040033..2040386 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
QOY19_RS10345	recF	2040389..2041498 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
QOY19_RS10350	-	2041510..2042376 (-)	867	WP_000398683.1	GRP family sugar transporter	-
QOY19_RS10355	-	2042432..2043094 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
QOY19_RS10360	guaB	2043169..2044650 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
QOY19_RS10365	-	2044807..2045292 (-)	486	WP_001034427.1	arginine repressor	-
QOY19_RS10370	-	2045302..2045982 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=1044902 QOY19_RS10345 WP_000264870.1 2040389..2041498(+) (recF) [Streptococcus agalactiae isolate MRI Z2-270]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=1044902 QOY19_RS10345 WP_000264870.1 2040389..2041498(+) (recF) [Streptococcus agalactiae isolate MRI Z2-270]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447