Detailed information NTG1044845

Bioinformatically predicted

Overview

• Name: cqsS
• Type: Regulator
• Locus tag: ACEO96_RS18205
• Genome accession: NZ_CP168658
• Coordinates: 912401..913921 (+)
• Length: 506 a.a.
• NCBI ID: WP_373433448.1
• Uniprot ID: -
• Organism: Vibrio anguillarum strain VA1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	911278..916349	912401..913921	within	0

Gene organization within MGE regions

Location: 911278..916349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEO96_RS18200 (ACEO96_18200)	-	911278..912309 (-)	1032	WP_213972059.1	IS630 family transposase	-
ACEO96_RS18205 (ACEO96_18205)	cqsS	912401..913921 (+)	1521	WP_373433448.1	response regulator	Regulator
ACEO96_RS18210 (ACEO96_18210)	cqsA	914008..915189 (-)	1182	WP_194567949.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
ACEO96_RS18215 (ACEO96_18215)	-	915318..916349 (-)	1032	WP_213972059.1	IS630 family transposase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 57391.78 Da
• Isoelectric Point: 5.0931

>NTDB_id=1044845 ACEO96_RS18205 WP_373433448.1 912401..913921(+) (cqsS) [Vibrio anguillarum strain VA1]
MSIAKSFGAGIAHEMRNPLSALKASIEVMGSVLPNPTASKSESYTLPSKDLELIAGLLRDADEVIRSGNETIDLLLTSID
QNRVSTSTFKKHAVKPVIEEALRSFSYKRPEDRQAVTLKVVDDFDFLGSSTLLKYVLYNLLKNAFYYQNNDMFNIHITLK
SSENCHQITVKDNGVGIEPHLLDDIFKDFYTFGKNGSYGLGLPFCRKVMHAFGGDIICRSELGEWTEFTLTFPEYDSQAV
ANIKLDLMKAKSLLYIGKTSIVNRYLSEKSFYLGFQLNVLEPESTLRREEFEFEFDLIFVDLQTLDETPDYLTKLEPKLH
FTQAKVCYLYDQNQRYALTMERHLTIYPIEKHKLLLDGSAIIDELLFETEELIADKNVIPLKQYDYEKRILLVDDNHSLR
SFTALLLEKQGYEVLQASDGELALQMLANNSIDLVLMDIEMPIMDGISATLSIRSSTASYSKVPIIGHTGDNSPSTIEKI
RTSGMNDYVLKPADKTLLLKKLSHWI

Nucleotide

• Length: 1521 bp

>NTDB_id=1044845 ACEO96_RS18205 WP_373433448.1 912401..913921(+) (cqsS) [Vibrio anguillarum strain VA1]
GTGTCGATTGCCAAGTCTTTTGGCGCAGGGATTGCGCATGAAATGAGAAATCCATTAAGTGCGTTAAAAGCGTCAATTGA
AGTAATGGGTTCAGTATTGCCCAATCCTACGGCATCCAAATCAGAATCTTATACGCTACCGTCTAAAGATTTAGAGCTGA
TTGCTGGGCTATTAAGAGATGCTGATGAAGTCATTCGCTCCGGTAATGAGACCATTGATTTGCTGTTAACTTCGATTGAT
CAAAATAGGGTCTCAACATCGACCTTTAAAAAGCATGCTGTAAAGCCTGTTATAGAAGAGGCACTGCGCAGTTTTTCTTA
TAAAAGACCAGAAGACAGGCAGGCAGTGACTCTTAAGGTGGTGGATGACTTTGATTTTTTAGGCAGCAGTACACTGTTAA
AATACGTGCTCTATAATCTACTCAAGAATGCGTTCTACTATCAAAATAACGATATGTTTAATATCCATATCACCTTGAAA
TCAAGTGAGAATTGCCACCAAATTACAGTGAAAGACAATGGTGTTGGTATTGAACCTCATTTGCTGGACGATATTTTTAA
AGACTTTTATACCTTCGGTAAAAATGGCAGCTATGGTCTGGGGTTACCCTTTTGCCGTAAAGTAATGCATGCTTTTGGAG
GGGATATTATCTGCCGTTCTGAACTTGGAGAGTGGACGGAGTTTACCTTAACGTTTCCCGAGTATGATTCGCAAGCTGTT
GCTAATATTAAACTTGATCTAATGAAGGCGAAATCTCTGCTTTATATTGGCAAAACGAGCATAGTGAATCGTTATCTCAG
TGAGAAATCGTTCTATCTTGGTTTCCAGCTTAATGTCTTAGAGCCTGAGAGTACTTTGCGTCGAGAAGAGTTTGAATTTG
AGTTTGATCTGATCTTTGTGGATCTGCAAACGTTGGATGAAACGCCGGATTACTTAACCAAACTGGAACCTAAACTGCAT
TTTACACAAGCAAAAGTTTGCTATTTATATGACCAAAATCAGCGTTACGCGCTGACGATGGAGCGTCATTTAACCATTTA
CCCAATTGAAAAGCACAAATTGTTATTGGATGGATCGGCGATTATTGATGAACTACTCTTTGAAACGGAAGAGCTTATTG
CCGATAAAAATGTTATCCCGTTAAAACAATATGATTATGAAAAACGAATTTTGTTGGTCGATGATAACCACTCCTTACGT
AGCTTCACCGCTCTGCTGCTAGAAAAGCAAGGGTATGAAGTACTGCAAGCGAGCGATGGGGAATTAGCATTACAAATGTT
GGCCAATAATTCAATTGACTTGGTGTTAATGGATATTGAAATGCCGATTATGGATGGTATTTCGGCCACTTTATCTATCC
GTTCATCCACCGCTTCTTACAGTAAAGTGCCTATTATTGGGCATACGGGTGACAATAGCCCTTCAACGATCGAAAAAATC
CGTACATCAGGAATGAATGATTACGTTTTAAAACCAGCGGATAAAACGCTATTGTTAAAAAAATTAAGTCACTGGATTTA
A

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (130-234)

• Response regulator receiver domain (Response_reg) (390-502)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsS	Vibrio cholerae strain A1552	52.767	100	0.528