Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACEO96_RS12720 | Genome accession | NZ_CP168657 |
| Coordinates | 2777465..2778067 (-) | Length | 200 a.a. |
| NCBI ID | WP_047690569.1 | Uniprot ID | - |
| Organism | Vibrio anguillarum strain VA1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2772465..2783067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEO96_RS12695 (ACEO96_12695) | aroB | 2772811..2773899 (-) | 1089 | WP_026027426.1 | 3-dehydroquinate synthase | - |
| ACEO96_RS12700 (ACEO96_12700) | aroK | 2773924..2774445 (-) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| ACEO96_RS12705 (ACEO96_12705) | pilQ | 2774632..2776347 (-) | 1716 | WP_013855889.1 | type IV pilus secretin PilQ | Machinery gene |
| ACEO96_RS12710 (ACEO96_12710) | pilP | 2776371..2776892 (-) | 522 | WP_373433101.1 | pilus assembly protein PilP | Machinery gene |
| ACEO96_RS12715 (ACEO96_12715) | pilO | 2776879..2777472 (-) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACEO96_RS12720 (ACEO96_12720) | pilN | 2777465..2778067 (-) | 603 | WP_047690569.1 | PilN domain-containing protein | Machinery gene |
| ACEO96_RS12725 (ACEO96_12725) | pilM | 2778057..2779067 (-) | 1011 | WP_373433102.1 | type IV pilus assembly protein PilM | Machinery gene |
| ACEO96_RS12730 (ACEO96_12730) | - | 2779217..2781715 (+) | 2499 | WP_373433103.1 | penicillin-binding protein 1A | - |
| ACEO96_RS12735 (ACEO96_12735) | - | 2781753..2782214 (-) | 462 | Protein_2429 | transposase | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 22673.19 Da Isoelectric Point: 9.6928
>NTDB_id=1044836 ACEO96_RS12720 WP_047690569.1 2777465..2778067(-) (pilN) [Vibrio anguillarum strain VA1]
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAALTKIRPTGAVHD
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAALTKIRPTGAVHD
Nucleotide
Download Length: 603 bp
>NTDB_id=1044836 ACEO96_RS12720 WP_047690569.1 2777465..2778067(-) (pilN) [Vibrio anguillarum strain VA1]
ATGTTGCATAGTATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCGCAGCAGCAAGAGTCTC
GTTTGGCTTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGTCAACGCAATAAAACCACCGAGTTGATGAACTTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTG
CACGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCGCCGACACCACAGGGCGC
TGCACTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
ATGTTGCATAGTATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCGCAGCAGCAAGAGTCTC
GTTTGGCTTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGTCAACGCAATAAAACCACCGAGTTGATGAACTTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTG
CACGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCGCCGACACCACAGGGCGC
TGCACTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
66.316 |
95 |
0.63 |
| pilN | Vibrio campbellii strain DS40M4 |
65.775 |
93.5 |
0.615 |