Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   ACEO96_RS05125 Genome accession   NZ_CP168657
Coordinates   1104678..1106084 (+) Length   468 a.a.
NCBI ID   WP_026028245.1    Uniprot ID   -
Organism   Vibrio anguillarum strain VA1     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099678..1111084
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEO96_RS05120 (ACEO96_05120) uvrB 1102406..1104436 (+) 2031 WP_373433285.1 excinuclease ABC subunit UvrB -
  ACEO96_RS05125 (ACEO96_05125) luxO 1104678..1106084 (+) 1407 WP_026028245.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  ACEO96_RS05130 (ACEO96_05130) luxU 1106089..1106427 (+) 339 WP_064624851.1 quorum-sensing phosphorelay protein LuxU -
  ACEO96_RS05135 (ACEO96_05135) - 1106443..1107333 (-) 891 WP_013857260.1 YvcK family protein -
  ACEO96_RS05140 (ACEO96_05140) moaA 1107645..1108634 (+) 990 WP_026028246.1 GTP 3',8-cyclase MoaA -
  ACEO96_RS05145 (ACEO96_05145) moaB 1108702..1109214 (+) 513 WP_010320682.1 molybdenum cofactor biosynthesis protein B -
  ACEO96_RS05150 (ACEO96_05150) moaC 1109225..1109725 (+) 501 WP_010320681.1 cyclic pyranopterin monophosphate synthase MoaC -
  ACEO96_RS05155 (ACEO96_05155) moaD 1109718..1109963 (+) 246 WP_010320680.1 molybdopterin synthase sulfur carrier subunit -
  ACEO96_RS05160 (ACEO96_05160) moaE 1109966..1110436 (+) 471 WP_038148363.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 468 a.a.        Molecular weight: 52144.54 Da        Isoelectric Point: 6.0305

>NTDB_id=1044821 ACEO96_RS05125 WP_026028245.1 1104678..1106084(+) (luxO) [Vibrio anguillarum strain VA1]
MQPDFSLQKAKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESLAHREPDLILLDLRLPDMTGMDVLHAVKSHY
PNVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNEAGNPGNQNYQGFIGSSQTMQSVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGDDVIEIAYSLLGFMSKEEGKGFVRLAPEVVERFTRYEWPGNVRQLQNVLRNVVVLNHGNEIELSMLPPPLNQVVDNKI
RLANLTTDTRKENITVHDIFPLWMTEKQAIEQAIEACDGNIPKAASYLDVSPSTIYRKLQAWNSRENS

Nucleotide


Download         Length: 1407 bp        

>NTDB_id=1044821 ACEO96_RS05125 WP_026028245.1 1104678..1106084(+) (luxO) [Vibrio anguillarum strain VA1]
ATGCAACCTGACTTTTCTCTACAAAAGGCTAAATATCTTTTGATGGTGGAAGATACGGCTTCCGTTGCGGCGCTGTATCG
TTCATACCTCACCCCCCTTGAAATCGATATCAATATTGTTGGTACAGGTCGTGATGCGATAGAGAGTTTAGCTCACCGAG
AGCCGGACCTCATATTGCTGGATCTTCGATTACCCGATATGACGGGCATGGACGTTTTACATGCTGTGAAAAGTCACTAC
CCCAATGTGCCAGTGATATTCATGACCGCTCATGGTTCGATTGATACCGCAGTGGAAGCGATGCGTCACGGTGCCCAAGA
TTTCTTGATCAAACCTTGTGAAGCAGACCGCTTGCGCGTCACGGTTAACAACGCCATACGTAAAGCTAGCAAACTAAAAA
ATGAGGCTGGTAACCCGGGTAATCAGAACTACCAAGGTTTTATCGGCAGCAGTCAAACCATGCAATCAGTCTATCGAACC
ATTGACTCAGCGGCCTCCAGTAAAGCCAGTATTTTTATTACTGGCGAAAGTGGCACGGGTAAAGAGGTGTGCGCAGAAGC
GATTCATGCGGCCAGTAAACGTGGCGATAAACCCTTCATTGCGATTAACTGCGCCGCCATTCCTAAAGACTTGATAGAGA
GTGAACTCTTTGGCCACGTGAAAGGCGCATTTACTGGCGCAGCGACCGACCGCCAAGGCGCAGCCGAGTTGGCTGATGGC
GGCACACTGTTTTTGGATGAACTGTGTGAAATGGATTTGGATTTGCAGACCAAGCTGTTGCGCTTTATCCAAACGGGCAC
ATTCCAGAAAGTGGGCTCATCGAAGATGAAAAGTGTCGATGTTCGTTTTGTCTGCGCTACCAACCGCGATCCATGGAAAG
AGGTACAAGAGGGTCGTTTTCGTGAAGATTTGTACTATCGTCTTTATGTGATCCCATTGCATTTACCACCGCTACGCGAG
CGAGGCGATGACGTTATTGAAATTGCTTACTCTTTGCTCGGCTTTATGTCTAAAGAAGAAGGCAAAGGTTTTGTCCGCTT
AGCGCCAGAGGTTGTGGAGCGTTTTACGCGCTATGAATGGCCGGGTAATGTGCGTCAACTGCAAAACGTGTTGCGGAATG
TGGTGGTATTGAACCACGGTAACGAGATCGAACTGAGCATGTTACCGCCACCGCTAAATCAAGTCGTGGATAACAAGATC
CGATTAGCAAACCTAACGACGGATACGCGCAAGGAAAATATAACCGTGCACGATATTTTTCCTTTATGGATGACGGAAAA
ACAAGCCATCGAACAAGCGATAGAAGCGTGTGATGGTAATATTCCTAAAGCAGCCAGTTATTTAGACGTTAGCCCTTCAA
CGATCTACCGCAAGCTTCAAGCGTGGAACAGTAGAGAGAACTCATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-122)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)

Bacterial regulatory protein, Fis family (HTH_8)

(422-462)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

87.832

96.581

0.848
  pilR Pseudomonas aeruginosa PAK

38.178

98.504

0.376

Multiple sequence alignment