Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | ACEO96_RS03015 | Genome accession | NZ_CP168657 |
| Coordinates | 616182..616799 (-) | Length | 205 a.a. |
| NCBI ID | WP_017043694.1 | Uniprot ID | A0A233HMW8 |
| Organism | Vibrio anguillarum strain VA1 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 611182..621799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEO96_RS03005 (ACEO96_03005) | aceF | 612453..614336 (+) | 1884 | WP_088731724.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| ACEO96_RS03010 (ACEO96_03010) | lpdA | 614637..616064 (+) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| ACEO96_RS03015 (ACEO96_03015) | opaR | 616182..616799 (-) | 618 | WP_017043694.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| ACEO96_RS03020 (ACEO96_03020) | hpt | 617171..617701 (+) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| ACEO96_RS03025 (ACEO96_03025) | can | 617786..618454 (-) | 669 | WP_013857670.1 | carbonate dehydratase | - |
| ACEO96_RS03030 (ACEO96_03030) | - | 618705..620372 (+) | 1668 | WP_373433355.1 | SulP family inorganic anion transporter | - |
| ACEO96_RS03035 (ACEO96_03035) | - | 620506..621426 (+) | 921 | WP_026027559.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23672.24 Da Isoelectric Point: 6.1461
>NTDB_id=1044817 ACEO96_RS03015 WP_017043694.1 616182..616799(-) (opaR) [Vibrio anguillarum strain VA1]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=1044817 ACEO96_RS03015 WP_017043694.1 616182..616799(-) (opaR) [Vibrio anguillarum strain VA1]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTATTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGTGTACTCGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTATTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGTGTACTCGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
82.178 |
98.537 |
0.81 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |