Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACEPWM_RS05660 Genome accession   NZ_CP168642
Coordinates   1189878..1190750 (+) Length   290 a.a.
NCBI ID   WP_000620183.1    Uniprot ID   A0A6B1RG35
Organism   Staphylococcus aureus strain NCCP11854     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1184878..1195750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPWM_RS05635 (ACEPWM_05635) - 1185023..1185790 (+) 768 WP_000176399.1 ribonuclease HII -
  ACEPWM_RS05640 (ACEPWM_05640) sucC 1185899..1187065 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACEPWM_RS05645 (ACEPWM_05645) sucD 1187087..1187995 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  ACEPWM_RS05650 (ACEPWM_05650) - 1188282..1188434 (+) 153 Protein_1102 cell wall hydrolase -
  ACEPWM_RS05655 (ACEPWM_05655) fmhC 1188462..1189706 (+) 1245 WP_000672856.1 FemA/FemB family glycyltransferase FmhC -
  ACEPWM_RS05660 (ACEPWM_05660) dprA 1189878..1190750 (+) 873 WP_000620183.1 DNA-processing protein DprA Machinery gene
  ACEPWM_RS05665 (ACEPWM_05665) topA 1190923..1192998 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  ACEPWM_RS05670 (ACEPWM_05670) trmFO 1193154..1194461 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33532.95 Da        Isoelectric Point: 9.5191

>NTDB_id=1044636 ACEPWM_RS05660 WP_000620183.1 1189878..1190750(+) (dprA) [Staphylococcus aureus strain NCCP11854]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNINLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQIHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1044636 ACEPWM_RS05660 WP_000620183.1 1189878..1190750(+) (dprA) [Staphylococcus aureus strain NCCP11854]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
AAATTTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAATACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B1RG35

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979

Multiple sequence alignment