Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   QOR71_RS01130 Genome accession   NZ_OX461103
Coordinates   190294..190665 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae isolate MRI Z2-149     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 185294..195665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR71_RS01095 - 186470..186835 (+) 366 WP_000285373.1 DUF1033 family protein -
  QOR71_RS01100 comGA 187008..187979 (+) 972 WP_000250805.1 competence type IV pilus ATPase ComGA Machinery gene
  QOR71_RS01105 comGB 187873..188916 (+) 1044 WP_223295889.1 competence type IV pilus assembly protein ComGB Machinery gene
  QOR71_RS01110 comGC/cglC 188913..189242 (+) 330 WP_000793380.1 competence type IV pilus major pilin ComGC Machinery gene
  QOR71_RS01115 comGD 189217..189630 (+) 414 WP_000244261.1 competence type IV pilus minor pilin ComGD Machinery gene
  QOR71_RS01120 comGE 189656..189901 (+) 246 WP_283572946.1 competence type IV pilus minor pilin ComGE -
  QOR71_RS01125 comGF 189855..190316 (+) 462 WP_001878820.1 competence type IV pilus minor pilin ComGF Machinery gene
  QOR71_RS01130 comGG 190294..190665 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QOR71_RS01135 comGH 190780..191754 (+) 975 WP_001008574.1 N-6 DNA methylase Machinery gene
  QOR71_RS01140 - 191786..192979 (+) 1194 WP_000047534.1 acetate kinase -
  QOR71_RS01145 - 193131..193337 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  QOR71_RS01150 - 193396..193533 (+) 138 WP_001865900.1 hypothetical protein -
  QOR71_RS01155 - 193574..194029 (+) 456 WP_000905673.1 hypothetical protein -
  QOR71_RS01160 - 194098..194763 (+) 666 WP_000008113.1 type II CAAX endopeptidase family protein -
  QOR71_RS01165 proC 194784..195554 (-) 771 WP_001865901.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=1044600 QOR71_RS01130 WP_000601104.1 190294..190665(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-149]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=1044600 QOR71_RS01130 WP_000601104.1 190294..190665(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-149]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366
  comGG Streptococcus mutans UA159

44.554

82.114

0.366