Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEN8U_RS12180 | Genome accession | NZ_CP168531 |
| Coordinates | 63877..65037 (+) | Length | 386 a.a. |
| NCBI ID | WP_015001544.1 | Uniprot ID | K0DI44 |
| Organism | Paraburkholderia phenoliruptrix strain CT11-68 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58877..70037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN8U_RS12150 (ACEN8U_12145) | - | 59462..60079 (+) | 618 | WP_013587039.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| ACEN8U_RS12155 (ACEN8U_12150) | pth | 60230..60832 (+) | 603 | WP_015001548.1 | aminoacyl-tRNA hydrolase | - |
| ACEN8U_RS12160 (ACEN8U_12155) | hisC | 60905..61984 (+) | 1080 | WP_310104980.1 | histidinol-phosphate transaminase | - |
| ACEN8U_RS12165 (ACEN8U_12160) | - | 62059..62316 (-) | 258 | WP_013337947.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ACEN8U_RS12170 (ACEN8U_12165) | coaD | 62380..62895 (-) | 516 | WP_013337946.1 | pantetheine-phosphate adenylyltransferase | - |
| ACEN8U_RS12175 (ACEN8U_12170) | rsmD | 63008..63622 (-) | 615 | WP_310104978.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACEN8U_RS12180 (ACEN8U_12175) | pilA | 63877..65037 (+) | 1161 | WP_015001544.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ACEN8U_RS12185 (ACEN8U_12180) | maiA | 65144..65788 (-) | 645 | WP_015001543.1 | maleylacetoacetate isomerase | - |
| ACEN8U_RS12190 (ACEN8U_12185) | - | 65814..66512 (-) | 699 | WP_310104972.1 | fumarylacetoacetate hydrolase family protein | - |
| ACEN8U_RS12195 (ACEN8U_12190) | ybiB | 66729..67700 (+) | 972 | WP_310104969.1 | DNA-binding protein YbiB | - |
| ACEN8U_RS12200 (ACEN8U_12195) | - | 67703..68086 (-) | 384 | WP_015001540.1 | nuclear transport factor 2 family protein | - |
| ACEN8U_RS12205 (ACEN8U_12200) | - | 68127..68690 (-) | 564 | WP_310106323.1 | acyloxyacyl hydrolase | - |
| ACEN8U_RS12210 (ACEN8U_12205) | rpoH | 69054..69989 (+) | 936 | WP_013587030.1 | RNA polymerase sigma factor RpoH | - |
Sequence
Protein
Download Length: 386 a.a. Molecular weight: 41211.07 Da Isoelectric Point: 4.6308
>NTDB_id=1044501 ACEN8U_RS12180 WP_015001544.1 63877..65037(+) (pilA) [Paraburkholderia phenoliruptrix strain CT11-68]
MFSFFKRFKGSKESENAPDESPTAADEFVDESTAVETPAAPPAEVAPQAAPSLAPQFAPEAEPETDFEESSLETVEIVPP
PVQDASAKRSWLTRLKTGLSKTSSSLTGIFVGTKIDEDLYEELETALLMSDAGVDATEFLLEALREKVRAERLTEPQQVK
AALRALLVDLLKPLEKSLMLGRAKPLVVMIAGVNGAGKTTSIGKLAKHLQSFNQSVLLAAGDTFRAAAREQLAIWGQRNN
VTVVAQESGDPAAVIFDAVGAARARKIDVMMADTAGRLPTQLHLMEELRKVKRVIGKAQDGAPHEVLLVIDANTGQNALT
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFSAEEFSDALLGA
MFSFFKRFKGSKESENAPDESPTAADEFVDESTAVETPAAPPAEVAPQAAPSLAPQFAPEAEPETDFEESSLETVEIVPP
PVQDASAKRSWLTRLKTGLSKTSSSLTGIFVGTKIDEDLYEELETALLMSDAGVDATEFLLEALREKVRAERLTEPQQVK
AALRALLVDLLKPLEKSLMLGRAKPLVVMIAGVNGAGKTTSIGKLAKHLQSFNQSVLLAAGDTFRAAAREQLAIWGQRNN
VTVVAQESGDPAAVIFDAVGAARARKIDVMMADTAGRLPTQLHLMEELRKVKRVIGKAQDGAPHEVLLVIDANTGQNALT
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFSAEEFSDALLGA
Nucleotide
Download Length: 1161 bp
>NTDB_id=1044501 ACEN8U_RS12180 WP_015001544.1 63877..65037(+) (pilA) [Paraburkholderia phenoliruptrix strain CT11-68]
ATGTTCAGCTTTTTCAAACGATTCAAGGGTTCGAAAGAGTCCGAAAACGCGCCAGACGAGTCGCCAACCGCTGCAGATGA
GTTCGTCGACGAGTCCACGGCGGTAGAAACGCCGGCCGCCCCGCCCGCCGAAGTTGCGCCGCAGGCTGCGCCGTCGCTCG
CCCCACAATTCGCGCCAGAAGCCGAGCCCGAGACGGATTTCGAAGAGTCGTCGCTCGAGACCGTGGAAATCGTGCCGCCG
CCGGTGCAGGACGCGAGCGCGAAACGCTCGTGGCTGACTCGTCTGAAGACGGGCTTGTCGAAGACCAGTTCCAGCCTCAC
CGGCATTTTTGTCGGCACGAAGATCGACGAGGATTTGTACGAAGAGCTGGAAACCGCGCTGCTCATGTCCGACGCGGGCG
TCGACGCCACCGAATTCCTGCTCGAGGCTTTGCGCGAGAAAGTGCGCGCCGAGCGTCTCACCGAGCCGCAGCAGGTCAAA
GCGGCGCTGCGCGCGCTGCTGGTCGATCTGTTGAAACCGCTGGAAAAGTCGCTCATGCTCGGGCGCGCCAAGCCGCTCGT
CGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCCAAGCATCTGCAGAGCTTTAACC
AGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGTTGGCGATCTGGGGTCAGCGCAACAAC
GTGACGGTGGTTGCGCAGGAAAGCGGCGACCCGGCCGCCGTGATTTTCGACGCGGTCGGCGCCGCGCGGGCGCGCAAGAT
CGACGTGATGATGGCGGACACGGCCGGCCGTCTGCCCACGCAGCTGCATCTGATGGAAGAGCTGCGCAAAGTGAAGCGCG
TGATCGGCAAGGCGCAGGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCCAATACGGGGCAGAACGCGCTCACG
CAGGTCAAGGCTTTCGACGACGCGCTCGGGCTTACGGGGCTGATCGTGACCAAGCTCGACGGCACGGCGAAAGGCGGCAT
TCTTGCGGCTATCGCGCGGCAAAGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAAGATCTGCAGCCGT
TCAGCGCGGAAGAGTTTTCAGACGCGTTGCTGGGCGCCTGA
ATGTTCAGCTTTTTCAAACGATTCAAGGGTTCGAAAGAGTCCGAAAACGCGCCAGACGAGTCGCCAACCGCTGCAGATGA
GTTCGTCGACGAGTCCACGGCGGTAGAAACGCCGGCCGCCCCGCCCGCCGAAGTTGCGCCGCAGGCTGCGCCGTCGCTCG
CCCCACAATTCGCGCCAGAAGCCGAGCCCGAGACGGATTTCGAAGAGTCGTCGCTCGAGACCGTGGAAATCGTGCCGCCG
CCGGTGCAGGACGCGAGCGCGAAACGCTCGTGGCTGACTCGTCTGAAGACGGGCTTGTCGAAGACCAGTTCCAGCCTCAC
CGGCATTTTTGTCGGCACGAAGATCGACGAGGATTTGTACGAAGAGCTGGAAACCGCGCTGCTCATGTCCGACGCGGGCG
TCGACGCCACCGAATTCCTGCTCGAGGCTTTGCGCGAGAAAGTGCGCGCCGAGCGTCTCACCGAGCCGCAGCAGGTCAAA
GCGGCGCTGCGCGCGCTGCTGGTCGATCTGTTGAAACCGCTGGAAAAGTCGCTCATGCTCGGGCGCGCCAAGCCGCTCGT
CGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCCAAGCATCTGCAGAGCTTTAACC
AGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGTTGGCGATCTGGGGTCAGCGCAACAAC
GTGACGGTGGTTGCGCAGGAAAGCGGCGACCCGGCCGCCGTGATTTTCGACGCGGTCGGCGCCGCGCGGGCGCGCAAGAT
CGACGTGATGATGGCGGACACGGCCGGCCGTCTGCCCACGCAGCTGCATCTGATGGAAGAGCTGCGCAAAGTGAAGCGCG
TGATCGGCAAGGCGCAGGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCCAATACGGGGCAGAACGCGCTCACG
CAGGTCAAGGCTTTCGACGACGCGCTCGGGCTTACGGGGCTGATCGTGACCAAGCTCGACGGCACGGCGAAAGGCGGCAT
TCTTGCGGCTATCGCGCGGCAAAGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAAGATCTGCAGCCGT
TCAGCGCGGAAGAGTTTTCAGACGCGTTGCTGGGCGCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
54.415 |
100 |
0.591 |