Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACEPOU_RS08115 Genome accession   NZ_CP168498
Coordinates   1565473..1566042 (+) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain J22     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1560473..1571042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPOU_RS08085 (ACEPOU_08085) - 1561768..1562042 (-) 275 Protein_1560 lactococcin 972 family bacteriocin -
  ACEPOU_RS08090 (ACEPOU_08090) - 1562689..1562766 (-) 78 WP_099112139.1 putative holin-like toxin -
  ACEPOU_RS08095 (ACEPOU_08095) - 1562986..1563588 (-) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACEPOU_RS08100 (ACEPOU_08100) - 1563603..1563779 (-) 177 WP_000214898.1 YkvS family protein -
  ACEPOU_RS08105 (ACEPOU_08105) - 1563978..1564964 (+) 987 WP_000668821.1 lipoate--protein ligase -
  ACEPOU_RS08110 (ACEPOU_08110) - 1565045..1565263 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  ACEPOU_RS08115 (ACEPOU_08115) comK/comK1 1565473..1566042 (+) 570 WP_000287265.1 competence protein ComK Regulator
  ACEPOU_RS08130 (ACEPOU_08130) - 1566531..1568042 (-) 1512 WP_000414178.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ACEPOU_RS08135 (ACEPOU_08135) - 1568181..1569539 (-) 1359 WP_000021865.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=1044351 ACEPOU_RS08115 WP_000287265.1 1565473..1566042(+) (comK/comK1) [Staphylococcus aureus strain J22]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=1044351 ACEPOU_RS08115 WP_000287265.1 1565473..1566042(+) (comK/comK1) [Staphylococcus aureus strain J22]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment