Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACEPOS_RS01795 Genome accession   NZ_CP168497
Coordinates   366132..367118 (-) Length   328 a.a.
NCBI ID   WP_020977132.1    Uniprot ID   -
Organism   Staphylococcus aureus strain J23     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 361132..372118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPOS_RS01770 (ACEPOS_01770) - 361182..361775 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  ACEPOS_RS01775 (ACEPOS_01775) - 361879..362244 (+) 366 WP_000214067.1 truncated hemoglobin YjbI -
  ACEPOS_RS01780 (ACEPOS_01780) yjbH 362267..363073 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACEPOS_RS01785 (ACEPOS_01785) tnpA 363196..363681 (-) 486 WP_000093393.1 IS200/IS605 family transposase -
  ACEPOS_RS01790 (ACEPOS_01790) pepF 364276..366084 (-) 1809 WP_020977133.1 oligoendopeptidase F -
  ACEPOS_RS01795 (ACEPOS_01795) coiA 366132..367118 (-) 987 WP_020977132.1 competence protein CoiA Machinery gene
  ACEPOS_RS01800 (ACEPOS_01800) mecA 367239..367958 (-) 720 WP_001217728.1 adaptor protein MecA -
  ACEPOS_RS01805 (ACEPOS_01805) spxA 368329..368724 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACEPOS_RS01810 (ACEPOS_01810) trpS 369019..370008 (+) 990 WP_000448931.1 tryptophan--tRNA ligase -
  ACEPOS_RS01815 (ACEPOS_01815) opp4C 370050..370931 (-) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  ACEPOS_RS01820 (ACEPOS_01820) opp4B 370943..371905 (-) 963 WP_000593421.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38634.19 Da        Isoelectric Point: 9.6530

>NTDB_id=1044286 ACEPOS_RS01795 WP_020977132.1 366132..367118(-) (coiA) [Staphylococcus aureus strain J23]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EMEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1044286 ACEPOS_RS01795 WP_020977132.1 366132..367118(-) (coiA) [Staphylococcus aureus strain J23]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATGGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963

Multiple sequence alignment