Detailed information NTG1044035

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QOR61_RS11835
• Genome accession: NZ_OX460960
• Coordinates: 2304393..2305502 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae isolate MRI Z2-299
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2299393..2310502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR61_RS11810	-	2299765..2300604 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
QOR61_RS11815	pgsA	2300604..2301146 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QOR61_RS11820	-	2301269..2302552 (-)	1284	WP_000217762.1	pitrilysin family protein	-
QOR61_RS11825	-	2302554..2303798 (-)	1245	WP_000706188.1	pitrilysin family protein	-
QOR61_RS11830	yaaA	2304037..2304390 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
QOR61_RS11835	recF	2304393..2305502 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
QOR61_RS11840	-	2305610..2307064 (+)	1455	WP_031463830.1	IS1182-like element IS1563 family transposase	-
QOR61_RS11845	-	2307076..2307942 (-)	867	WP_000398683.1	GRP family sugar transporter	-
QOR61_RS11850	-	2307998..2308660 (-)	663	WP_001873330.1	helix-turn-helix transcriptional regulator	-
QOR61_RS11855	guaB	2308735..2310216 (-)	1482	WP_000073440.1	IMP dehydrogenase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=1044035 QOR61_RS11835 WP_000264870.1 2304393..2305502(+) (recF) [Streptococcus agalactiae isolate MRI Z2-299]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=1044035 QOR61_RS11835 WP_000264870.1 2304393..2305502(+) (recF) [Streptococcus agalactiae isolate MRI Z2-299]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447