Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACEPX0_RS05950 Genome accession   NZ_CP168436
Coordinates   1239754..1240626 (+) Length   290 a.a.
NCBI ID   WP_000620184.1    Uniprot ID   A0A0E1X7W8
Organism   Staphylococcus aureus strain P3L22A     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1234754..1245626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPX0_RS05930 (ACEPX0_05930) sucC 1234870..1236036 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACEPX0_RS05935 (ACEPX0_05935) sucD 1236058..1236966 (+) 909 WP_000110252.1 succinate--CoA ligase subunit alpha -
  ACEPX0_RS05940 (ACEPX0_05940) - 1237193..1238310 (+) 1118 Protein_1160 LysM peptidoglycan-binding domain-containing protein -
  ACEPX0_RS05945 (ACEPX0_05945) fmhC 1238338..1239582 (+) 1245 WP_000672864.1 FemA/FemB family glycyltransferase FmhC -
  ACEPX0_RS05950 (ACEPX0_05950) dprA 1239754..1240626 (+) 873 WP_000620184.1 DNA-processing protein DprA Machinery gene
  ACEPX0_RS05955 (ACEPX0_05955) topA 1240800..1242875 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  ACEPX0_RS05960 (ACEPX0_05960) trmFO 1243031..1244338 (+) 1308 WP_000195263.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33547.97 Da        Isoelectric Point: 9.5241

>NTDB_id=1044031 ACEPX0_RS05950 WP_000620184.1 1239754..1240626(+) (dprA) [Staphylococcus aureus strain P3L22A]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEIGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1044031 ACEPX0_RS05950 WP_000620184.1 1239754..1240626(+) (dprA) [Staphylococcus aureus strain P3L22A]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATACCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGCACATTAGC
ATTAAGAAATAAAATAGAAGAAATAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979

Multiple sequence alignment