Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QOR61_RS07745 Genome accession   NZ_OX460960
Coordinates   1499231..1499671 (-) Length   146 a.a.
NCBI ID   WP_000431167.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-299     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494231..1504671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR61_RS07730 - 1494438..1495064 (-) 627 WP_000449641.1 GTP pyrophosphokinase family protein -
  QOR61_RS07735 - 1495213..1495419 (-) 207 WP_001872189.1 hypothetical protein -
  QOR61_RS07740 - 1496069..1498477 (-) 2409 WP_000489008.1 YSIRK signal domain/LPXTG anchor domain surface protein -
  QOR61_RS07745 rcrR 1499231..1499671 (-) 441 WP_000431167.1 MarR family transcriptional regulator Regulator
  QOR61_RS07750 - 1499940..1502012 (+) 2073 WP_000726917.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOR61_RS07755 - 1502049..1502459 (-) 411 WP_000594936.1 peptide deformylase -
  QOR61_RS07760 gdhA 1502529..1503878 (-) 1350 WP_000200438.1 NADP-specific glutamate dehydrogenase -
  QOR61_RS07765 - 1504046..1504555 (+) 510 WP_000870957.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16967.90 Da        Isoelectric Point: 10.0644

>NTDB_id=1044005 QOR61_RS07745 WP_000431167.1 1499231..1499671(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-299]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKKKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMENFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1044005 QOR61_RS07745 WP_000431167.1 1499231..1499671(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-299]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTCGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATCTTACACATTTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGTTTTATTGCG
ATTGTACCATCTAAGACAGATAAGCGTGTAAAATACCTTTATTTGACTCACCTAGGTAAAAAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACTATGTTAGCAGGTATTACTAAAGAAGAGATTCGTACCACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCAATGGAAAATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment