Detailed information NTG1043827

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PGK76_RS03065
• Genome accession: NZ_CP168322
• Coordinates: 652848..653951 (+)
• Length: 367 a.a.
• NCBI ID: WP_154469316.1
• Uniprot ID: A0AAP6HG83
• Organism: Riemerella anatipestifer strain RCAD0866
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 647848..658951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGK76_RS03045 (PGK76_003045)	-	648102..651026 (-)	2925	WP_318161366.1	SusC/RagA family TonB-linked outer membrane protein	-
PGK76_RS03050 (PGK76_003050)	-	651372..651845 (+)	474	WP_154469314.1	Lrp/AsnC family transcriptional regulator	-
PGK76_RS03055 (PGK76_003055)	ruvC	651903..652457 (+)	555	WP_161398733.1	crossover junction endodeoxyribonuclease RuvC	-
PGK76_RS03060 (PGK76_003060)	-	652468..652845 (+)	378	WP_154469315.1	group III truncated hemoglobin	-
PGK76_RS03065 (PGK76_003065)	dprA	652848..653951 (+)	1104	WP_154469316.1	DNA-processing protein DprA	Machinery gene
PGK76_RS03070 (PGK76_003070)	gdhA	654135..655493 (+)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
PGK76_RS03075 (PGK76_003075)	-	655625..656275 (+)	651	WP_154469317.1	HD domain-containing protein	-
PGK76_RS03080 (PGK76_003080)	-	656327..656878 (+)	552	WP_229578814.1	hypothetical protein	-
PGK76_RS03090 (PGK76_003090)	comF	657100..657753 (+)	654	WP_004918078.1	ComF family protein	Machinery gene

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40407.34 Da
• Isoelectric Point: 6.3958

>NTDB_id=1043827 PGK76_RS03065 WP_154469316.1 652848..653951(+) (dprA) [Riemerella anatipestifer strain RCAD0866]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDIANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=1043827 PGK76_RS03065 WP_154469316.1 652848..653951(+) (dprA) [Riemerella anatipestifer strain RCAD0866]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATATTGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTACAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.278	100	0.943