Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8628_RS07620 | Genome accession | NZ_AP028335 |
| Coordinates | 1469736..1470344 (-) | Length | 202 a.a. |
| NCBI ID | WP_002851464.1 | Uniprot ID | A0AB36GA54 |
| Organism | Campylobacter jejuni strain BCH-10174 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1464736..1475344
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8628_RS07595 (B10174_15040) | - | 1464893..1465657 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| R8628_RS07600 (B10174_15050) | - | 1465661..1466425 (+) | 765 | WP_002860344.1 | TSUP family transporter | - |
| R8628_RS07605 (B10174_15060) | ctsF | 1466418..1467599 (-) | 1182 | WP_317653370.1 | type II secretion system F family protein | Machinery gene |
| R8628_RS07610 (B10174_15070) | ctsE | 1467596..1469155 (-) | 1560 | WP_070299446.1 | GspE/PulE family protein | Machinery gene |
| R8628_RS07615 (B10174_15080) | ctsX | 1469145..1469732 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| R8628_RS07620 (B10174_15090) | ctsP | 1469736..1470344 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R8628_RS07625 (B10174_15100) | ctsD | 1470337..1471749 (-) | 1413 | WP_002855316.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8628_RS07630 (B10174_15110) | ctsR | 1471727..1472038 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23742.78 Da Isoelectric Point: 9.9955
>NTDB_id=104372 R8628_RS07620 WP_002851464.1 1469736..1470344(-) (ctsP) [Campylobacter jejuni strain BCH-10174]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=104372 R8628_RS07620 WP_002851464.1 1469736..1470344(-) (ctsP) [Campylobacter jejuni strain BCH-10174]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
99.505 |
100 |
0.995 |