Detailed information NTG1043294

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QOR46_RS10920
• Genome accession: NZ_OX460934
• Coordinates: 2155860..2156969 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264871.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-335
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2150860..2161969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR46_RS10895	-	2151232..2152071 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
QOR46_RS10900	pgsA	2152071..2152613 (-)	543	WP_000239222.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QOR46_RS10905	-	2152736..2154019 (-)	1284	WP_000217765.1	pitrilysin family protein	-
QOR46_RS10910	-	2154021..2155265 (-)	1245	WP_000706188.1	pitrilysin family protein	-
QOR46_RS10915	yaaA	2155504..2155857 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
QOR46_RS10920	recF	2155860..2156969 (+)	1110	WP_000264871.1	DNA replication/repair protein RecF	Machinery gene
QOR46_RS10925	-	2156981..2157847 (-)	867	WP_000398683.1	GRP family sugar transporter	-
QOR46_RS10930	-	2157903..2158565 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
QOR46_RS10935	guaB	2158640..2160121 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
QOR46_RS10940	-	2160278..2160763 (-)	486	WP_001034427.1	arginine repressor	-
QOR46_RS10945	-	2160773..2161453 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42484.36 Da
• Isoelectric Point: 7.8456

>NTDB_id=1043294 QOR46_RS10920 WP_000264871.1 2155860..2156969(+) (recF) [Streptococcus agalactiae isolate MRI Z2-335]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKKNVQTFITTTSLEHLSALPDQLKIFNISDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=1043294 QOR46_RS10920 WP_000264871.1 2155860..2156969(+) (recF) [Streptococcus agalactiae isolate MRI Z2-335]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGGCCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTTATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAAAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACATTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.912	98.374	0.629
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444