Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACEN3N_RS19465 Genome accession   NZ_CP168228
Coordinates   4114068..4116293 (+) Length   741 a.a.
NCBI ID   WP_151962291.1    Uniprot ID   -
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4109068..4121293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS19440 (ACEN3N_19440) - 4110224..4110562 (-) 339 WP_151962290.1 tRNA-binding protein -
  ACEN3N_RS19445 (ACEN3N_19445) - 4111257..4111520 (+) 264 WP_004825305.1 DUF2798 domain-containing protein -
  ACEN3N_RS19450 (ACEN3N_19450) - 4111604..4111939 (-) 336 WP_004825308.1 hypothetical protein -
  ACEN3N_RS19455 (ACEN3N_19455) gspG 4112221..4112658 (-) 438 WP_004825310.1 type II secretion system major pseudopilin GspG -
  ACEN3N_RS19460 (ACEN3N_19460) gspF 4112694..4113899 (-) 1206 WP_151713668.1 type II secretion system inner membrane protein GspF -
  ACEN3N_RS19465 (ACEN3N_19465) priA 4114068..4116293 (+) 2226 WP_151962291.1 primosomal protein N' Machinery gene
  ACEN3N_RS19470 (ACEN3N_19470) - 4116344..4116472 (-) 129 WP_009587170.1 hypothetical protein -
  ACEN3N_RS19475 (ACEN3N_19475) - 4116507..4116803 (-) 297 WP_227567252.1 hypothetical protein -
  ACEN3N_RS19480 (ACEN3N_19480) - 4117077..4117466 (-) 390 WP_005034252.1 hypothetical protein -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84208.59 Da        Isoelectric Point: 9.0387

>NTDB_id=1043284 ACEN3N_RS19465 WP_151962291.1 4114068..4116293(+) (priA) [Acinetobacter bereziniae strain 2024CK-01176]
MPNTIVTPQTIYRVQVAVPVYLNDCFDYQVSAEQYAQAEIGARVAVSFGRQNLVGVIVKKIPINEPIDSHFKLKAITELL
DDHAILDSKVLNLLTWSSQYYQFPIGEVIQTALPTLLRQGKPYDLLARVWKVIDLNAEDKVKRSEKQQDAYKILKLHPKG
TQENILNLSGIETATLKVLEKKAIIQFALEPQNTQPESVQLAQLPLTPNEDQKKAIQTILKALKKYQAFLLDGLTGSGKT
EVYLQVMHEVLKQSKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDSKRLQAWQHAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIESYYLARQEKLTRIELNQRAGVALMPKMHL
IDLKVAKKQHGLSDVLIGEIKKRLDKKEQVLIFLNRRGYAPVLICESCGWQANCPNCDAHFTLHLKPYQHLHCHHCGTIN
RLPDACPQCNQQQLKPIGMGTAKVEETLIELFPNFPVLRVDRDSTSRVGSWQKIYDQIQKSEPTILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRATERTAQLIIQVAGRAGRGENKGEVYLQTLRPDHPLLNTLIHNDYRTFAKQTLKDRQAALL
PPFRYASLIRCESKHQEENLKFLTEMTQLLRQMSEPHLIDIWGPIPAPMERKAGRYQAHVVLLSQDRAKMHFYVHQWWTQ
LLQQKPSTMKVTIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=1043284 ACEN3N_RS19465 WP_151962291.1 4114068..4116293(+) (priA) [Acinetobacter bereziniae strain 2024CK-01176]
ATGCCGAATACCATTGTTACACCACAAACTATTTATCGTGTTCAAGTTGCTGTTCCAGTGTATTTGAATGACTGTTTTGA
CTATCAAGTGAGTGCTGAACAGTACGCACAGGCAGAAATCGGTGCACGTGTTGCTGTGTCTTTCGGACGACAAAACCTTG
TTGGGGTGATTGTAAAAAAAATTCCGATTAATGAACCTATAGACTCTCATTTTAAACTCAAAGCAATTACTGAACTATTA
GATGATCACGCTATTCTAGACAGTAAAGTTTTAAATTTATTGACATGGTCATCACAATATTATCAATTCCCAATTGGTGA
GGTGATTCAAACTGCCCTTCCTACATTACTCCGCCAAGGTAAACCTTATGATTTATTGGCTCGTGTCTGGAAAGTGATCG
ATTTAAATGCTGAAGACAAAGTAAAGCGTTCTGAAAAACAACAAGATGCTTATAAAATTCTAAAATTACATCCAAAAGGA
ACGCAGGAAAATATCCTAAATCTGAGTGGTATTGAAACAGCAACACTAAAAGTGCTTGAGAAAAAAGCAATTATCCAATT
TGCACTTGAACCTCAAAATACTCAACCTGAATCAGTTCAACTGGCTCAGTTGCCACTCACTCCTAATGAAGATCAAAAGA
AAGCCATCCAAACGATTTTAAAGGCACTAAAGAAATATCAAGCATTTTTGTTAGATGGTCTAACGGGAAGTGGTAAAACA
GAGGTTTATTTACAAGTGATGCATGAGGTACTGAAACAAAGCAAACAAGTGCTTGTTTTAGTCCCAGAAATTGGCTTAAC
ACCACAAACCATCAGCCGTTTTCAGTCACGCTTTCATTGCAATATTGCATTGCTTCACTCTGGTTTAAATGACAGCAAAC
GTTTACAAGCATGGCAACATGCACAAACAGGTAAAGCCTCTATTATTTTAGGGACTCGCTCTGCAATTTATACACCTTTA
CCTAATCTCGGTTTAATTATTCTGGATGAAGAGCATGATCTTTCATTTAAACAACAAGAAGGTTTCCGTTATCATGCCCG
TGATGTTGCTTTATACCGTGCGCATTTAGAAAATTGTCCAATTATCTTAGGTTCTGCCACACCAAGTATTGAAAGCTATT
ATTTGGCTCGTCAAGAAAAGCTGACACGTATTGAATTAAATCAACGTGCAGGCGTCGCATTGATGCCGAAAATGCATTTG
ATTGATTTAAAAGTTGCTAAGAAGCAACATGGCTTAAGTGATGTTTTAATCGGGGAAATTAAAAAGCGTTTAGATAAAAA
AGAACAGGTCTTAATCTTTTTAAATCGTCGCGGTTATGCACCTGTATTAATTTGTGAAAGTTGTGGATGGCAAGCCAACT
GCCCAAATTGTGATGCACACTTTACCTTACACTTAAAACCTTATCAGCATTTACACTGTCATCATTGTGGGACGATTAAT
CGCTTGCCTGATGCCTGCCCACAATGCAATCAACAACAATTAAAACCAATCGGCATGGGAACTGCAAAGGTTGAAGAAAC
CTTAATTGAATTATTCCCCAACTTTCCTGTACTTCGCGTCGATCGGGATTCAACTAGCCGTGTCGGCAGTTGGCAGAAAA
TCTATGATCAGATTCAAAAAAGTGAACCCACGATTTTGCTTGGGACGCAAATGCTCGCTAAAGGGCATCATTTCCCCTAT
GTCACTTTGGTTGCAATCTTAGATATAGATGCAGGTTTACTCAGTGTCGACTTTCGAGCAACAGAGCGTACAGCCCAATT
GATTATTCAAGTTGCAGGTCGGGCAGGTCGTGGAGAGAACAAAGGAGAAGTCTATTTGCAAACACTTCGACCTGATCATC
CTTTATTAAATACTTTGATTCACAATGACTATCGAACCTTTGCCAAGCAAACCTTAAAAGATCGTCAAGCCGCTTTGCTT
CCCCCTTTTCGCTATGCCAGTTTGATACGTTGTGAATCTAAACATCAGGAAGAAAATCTAAAGTTTTTGACTGAAATGAC
GCAATTACTTCGTCAAATGTCGGAACCACATTTAATCGATATTTGGGGACCTATTCCAGCTCCAATGGAGCGGAAAGCAG
GTCGTTACCAAGCACATGTGGTATTGCTTTCACAAGATCGAGCAAAAATGCACTTTTATGTGCATCAATGGTGGACCCAA
TTACTACAGCAAAAACCCTCTACAATGAAAGTAACGATTGATGTTGATCCACAAGAGTTGAGTTGA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Helicase conserved C-terminal domain (Helicase_C)

(532-598)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.525

100

0.715

Multiple sequence alignment