Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | ACEN3N_RS01905 | Genome accession | NZ_CP168228 |
| Coordinates | 409996..410460 (+) | Length | 154 a.a. |
| NCBI ID | WP_151961565.1 | Uniprot ID | - |
| Organism | Acinetobacter bereziniae strain 2024CK-01176 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 404996..415460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN3N_RS01895 (ACEN3N_01895) | - | 405506..406276 (+) | 771 | WP_151961563.1 | pilus assembly PilX N-terminal domain-containing protein | - |
| ACEN3N_RS01900 (ACEN3N_01900) | - | 406290..409985 (+) | 3696 | WP_151961564.1 | pilus assembly protein | - |
| ACEN3N_RS01905 (ACEN3N_01905) | comE | 409996..410460 (+) | 465 | WP_151961565.1 | type IV pilin protein | Machinery gene |
| ACEN3N_RS01910 (ACEN3N_01910) | - | 410454..410921 (+) | 468 | WP_151961566.1 | type IV pilin protein | - |
| ACEN3N_RS01915 (ACEN3N_01915) | rpsP | 411067..411324 (+) | 258 | WP_004826436.1 | 30S ribosomal protein S16 | - |
| ACEN3N_RS01920 (ACEN3N_01920) | rimM | 411347..411895 (+) | 549 | WP_004826439.1 | ribosome maturation factor RimM | - |
| ACEN3N_RS01925 (ACEN3N_01925) | trmD | 411936..412685 (+) | 750 | WP_100886069.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACEN3N_RS01930 (ACEN3N_01930) | rplS | 412889..413260 (+) | 372 | WP_004826442.1 | 50S ribosomal protein L19 | - |
| ACEN3N_RS01935 (ACEN3N_01935) | - | 413696..414658 (-) | 963 | WP_373350685.1 | lipase family alpha/beta hydrolase | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16942.56 Da Isoelectric Point: 9.8587
>NTDB_id=1043265 ACEN3N_RS01905 WP_151961565.1 409996..410460(+) (comE) [Acinetobacter bereziniae strain 2024CK-01176]
MKKKSCHSKGFTLIELMVVIVIVAIFAAIAIPSYQSFIRRSTAAQAQQEIQRIATLLERSKSRNFNYLGFTLSPAPFVIP
IGSIGTNVKYTITVRDGTDTSVVLTDTTASGQEYIIRAISNDNKNFSYILSSTGLRCKKLGTTMDYNCTGAEAW
MKKKSCHSKGFTLIELMVVIVIVAIFAAIAIPSYQSFIRRSTAAQAQQEIQRIATLLERSKSRNFNYLGFTLSPAPFVIP
IGSIGTNVKYTITVRDGTDTSVVLTDTTASGQEYIIRAISNDNKNFSYILSSTGLRCKKLGTTMDYNCTGAEAW
Nucleotide
Download Length: 465 bp
>NTDB_id=1043265 ACEN3N_RS01905 WP_151961565.1 409996..410460(+) (comE) [Acinetobacter bereziniae strain 2024CK-01176]
ATGAAAAAAAAATCTTGTCATTCTAAAGGTTTTACTTTGATTGAACTTATGGTAGTCATAGTGATTGTTGCAATATTTGC
AGCAATTGCTATTCCGAGCTATCAAAGTTTTATACGTAGATCTACTGCAGCTCAAGCGCAACAGGAGATTCAGCGAATTG
CCACACTTTTAGAGAGAAGTAAAAGTCGTAACTTTAATTATCTTGGTTTTACACTTTCTCCAGCCCCCTTTGTTATCCCG
ATAGGATCAATAGGAACTAATGTAAAATATACAATTACTGTAAGAGATGGGACGGACACTTCAGTTGTACTCACAGATAC
AACAGCATCAGGTCAAGAATATATTATTAGAGCTATATCAAATGATAATAAAAACTTTAGTTATATCTTGAGTAGTACAG
GACTACGTTGTAAAAAGTTGGGGACAACAATGGATTATAATTGTACTGGAGCTGAAGCATGGTAA
ATGAAAAAAAAATCTTGTCATTCTAAAGGTTTTACTTTGATTGAACTTATGGTAGTCATAGTGATTGTTGCAATATTTGC
AGCAATTGCTATTCCGAGCTATCAAAGTTTTATACGTAGATCTACTGCAGCTCAAGCGCAACAGGAGATTCAGCGAATTG
CCACACTTTTAGAGAGAAGTAAAAGTCGTAACTTTAATTATCTTGGTTTTACACTTTCTCCAGCCCCCTTTGTTATCCCG
ATAGGATCAATAGGAACTAATGTAAAATATACAATTACTGTAAGAGATGGGACGGACACTTCAGTTGTACTCACAGATAC
AACAGCATCAGGTCAAGAATATATTATTAGAGCTATATCAAATGATAATAAAAACTTTAGTTATATCTTGAGTAGTACAG
GACTACGTTGTAAAAAGTTGGGGACAACAATGGATTATAATTGTACTGGAGCTGAAGCATGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
46.386 |
100 |
0.5 |
| pilY2 | Acinetobacter baumannii D1279779 |
51.389 |
93.506 |
0.481 |