Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QOR55_RS01665 Genome accession   NZ_OX460911
Coordinates   279044..279778 (+) Length   244 a.a.
NCBI ID   WP_000589158.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-322     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 274044..284778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR55_RS01650 - 274966..276396 (+) 1431 WP_001217278.1 helix-turn-helix domain-containing protein -
  QOR55_RS01655 recP/tkt 276521..278506 (+) 1986 WP_000141867.1 transketolase Machinery gene
  QOR55_RS01660 - 278719..279024 (+) 306 WP_000711207.1 bacteriocin immunity protein -
  QOR55_RS01665 pptA 279044..279778 (+) 735 WP_000589158.1 ABC transporter ATP-binding protein Regulator
  QOR55_RS01670 - 279782..281386 (+) 1605 WP_001104591.1 ABC transporter permease -
  QOR55_RS01675 - 281594..282979 (-) 1386 WP_000085849.1 PTS transporter subunit EIIC -
  QOR55_RS01680 proB 283120..283923 (+) 804 WP_000820353.1 glutamate 5-kinase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27546.69 Da        Isoelectric Point: 4.6741

>NTDB_id=1042999 QOR55_RS01665 WP_000589158.1 279044..279778(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-322]
MIKFEHVSKVYGEKEALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTEHRDQIKKKIGYVP
DSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITKLVDIFELEEQRYNPIESFSHGMRQKVIVIGALLPNPDIWILDEPL
TGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDKDLETIYLELAGRQA
NREG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1042999 QOR55_RS01665 WP_000589158.1 279044..279778(+) (pptA) [Streptococcus agalactiae isolate MRI Z2-322]
ATGATTAAGTTTGAACATGTTTCGAAAGTATACGGAGAAAAAGAAGCTCTCAGTGATTTAACCCTCTCTATTAAAGATGG
TGAGATTTTTGGATTAATCGGTCACAATGGAGCAGGAAAAACAACGACAATTAGTATTCTAACATCTATTATTGATGCAA
CTTATGGCCAAGTCTATATTGATGACCTACTTTTGACAGAACATCGTGACCAAATTAAGAAAAAAATAGGTTATGTACCG
GACTCGCCAGATATTTTCTTAAATTTAACCGCAGAGGAATACTGGTACTTTTTAGCTAAAATTTATGATGTTGCCCCAGA
AGATATTGAAGCACGTATCACAAAATTGGTAGACATATTTGAACTAGAGGAGCAACGCTATAATCCTATTGAAAGTTTTT
CACATGGTATGCGTCAAAAAGTCATTGTTATAGGTGCTCTTCTTCCAAATCCTGATATTTGGATTCTAGATGAGCCGTTA
ACTGGTTTAGACCCTCAAGCTTCTTTTGATTTGAAAGAAATGATGAAAGAACATGCTAAAAATGGAAAAACAGTTATTTT
TTCAACACATGTTTTAGCAGTAGCAGAACAGTTATGCGACAGAATAGGTATTTTGAAACAAGGGAAATTAATCTTTGTCG
GTAGCTTAGGTGAGTTAAAAATGCAATATCCAGATAAAGATTTGGAAACTATCTATTTGGAATTAGCAGGACGTCAAGCT
AATAGGGAGGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

38.655

97.541

0.377
  pptA Streptococcus salivarius strain HSISS4

38.235

97.541

0.373

Multiple sequence alignment