Detailed information NTG1042974

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QOR56_RS10240
• Genome accession: NZ_OX460906
• Coordinates: 2059792..2060901 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264865.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-265
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2054792..2065901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR56_RS10215	-	2055164..2056003 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
QOR56_RS10220	pgsA	2056003..2056545 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QOR56_RS10225	-	2056668..2057951 (-)	1284	WP_000217756.1	pitrilysin family protein	-
QOR56_RS10230	-	2057953..2059197 (-)	1245	WP_000706187.1	pitrilysin family protein	-
QOR56_RS10235	yaaA	2059436..2059789 (+)	354	WP_283572286.1	S4 domain-containing protein YaaA	-
QOR56_RS10240	recF	2059792..2060901 (+)	1110	WP_000264865.1	DNA replication/repair protein RecF	Machinery gene
QOR56_RS10245	-	2061009..2062463 (+)	1455	WP_031463830.1	IS1182-like element IS1563 family transposase	-
QOR56_RS10250	-	2062475..2063341 (-)	867	WP_000398683.1	GRP family sugar transporter	-
QOR56_RS10255	-	2063397..2064059 (-)	663	WP_001871853.1	helix-turn-helix transcriptional regulator	-
QOR56_RS10260	guaB	2064134..2065615 (-)	1482	WP_000073440.1	IMP dehydrogenase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42512.33 Da
• Isoelectric Point: 7.3132

>NTDB_id=1042974 QOR56_RS10240 WP_000264865.1 2059792..2060901(+) (recF) [Streptococcus agalactiae isolate MRI Z2-265]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=1042974 QOR56_RS10240 WP_000264865.1 2059792..2060901(+) (recF) [Streptococcus agalactiae isolate MRI Z2-265]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.361	98.374	0.623
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447