Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACCK24_RS11375 | Genome accession | NZ_CP168154 |
| Coordinates | 2259119..2259514 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CUBIST-6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2254119..2264514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCK24_RS11350 (ACCK24_11350) | thiE | 2254718..2255359 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| ACCK24_RS11355 (ACCK24_11355) | thiM | 2255361..2256152 (-) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| ACCK24_RS11360 (ACCK24_11360) | thiD | 2256136..2256966 (-) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACCK24_RS11365 (ACCK24_11365) | tenA | 2256959..2257648 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| ACCK24_RS11370 (ACCK24_11370) | sceD | 2258035..2258730 (-) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| ACCK24_RS11375 (ACCK24_11375) | ssb | 2259119..2259514 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACCK24_RS11380 (ACCK24_11380) | - | 2259708..2260148 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACCK24_RS11385 (ACCK24_11385) | fabZ | 2260207..2260647 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACCK24_RS11390 (ACCK24_11390) | murA | 2260681..2261946 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACCK24_RS11395 (ACCK24_11395) | - | 2262057..2262290 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACCK24_RS11400 (ACCK24_11400) | - | 2262422..2262514 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| ACCK24_RS11405 (ACCK24_11405) | - | 2262852..2263256 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1042718 ACCK24_RS11375 WP_000932694.1 2259119..2259514(-) (ssb) [Staphylococcus aureus strain CUBIST-6]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1042718 ACCK24_RS11375 WP_000932694.1 2259119..2259514(-) (ssb) [Staphylococcus aureus strain CUBIST-6]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |