Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACDZ29_RS14415 Genome accession   NZ_CP168135
Coordinates   2874007..2874804 (+) Length   265 a.a.
NCBI ID   WP_375088015.1    Uniprot ID   -
Organism   Peribacillus sp. RS7     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2869007..2879804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDZ29_RS14390 (ACDZ29_14270) - 2869213..2870364 (+) 1152 WP_289323749.1 thiolase family protein -
  ACDZ29_RS14395 (ACDZ29_14275) - 2870499..2872079 (+) 1581 WP_375088014.1 fatty acid--CoA ligase -
  ACDZ29_RS14400 (ACDZ29_14280) - 2872486..2872668 (-) 183 WP_034306455.1 YfhD family protein -
  ACDZ29_RS14405 (ACDZ29_14285) - 2872784..2872906 (-) 123 WP_289323751.1 YfhE family protein -
  ACDZ29_RS14410 (ACDZ29_14290) - 2872960..2873880 (-) 921 WP_375091139.1 TIGR01777 family oxidoreductase -
  ACDZ29_RS14415 (ACDZ29_14295) recX 2874007..2874804 (+) 798 WP_375088015.1 recombination regulator RecX Regulator
  ACDZ29_RS14420 (ACDZ29_14300) - 2874878..2875189 (+) 312 WP_063234815.1 YfhH family protein -
  ACDZ29_RS14425 (ACDZ29_14305) - 2875230..2875385 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  ACDZ29_RS14430 (ACDZ29_14310) - 2875500..2875766 (+) 267 WP_289317925.1 YfhJ family protein -
  ACDZ29_RS14435 (ACDZ29_14315) - 2875821..2876798 (-) 978 WP_370013894.1 metal-dependent hydrolase -
  ACDZ29_RS14440 (ACDZ29_14320) mutY 2877005..2878123 (+) 1119 WP_370013895.1 A/G-specific adenine glycosylase -
  ACDZ29_RS14445 (ACDZ29_14325) - 2878447..2878671 (-) 225 WP_289323755.1 hypothetical protein -
  ACDZ29_RS14450 (ACDZ29_14330) fabL 2878740..2879489 (+) 750 WP_214747519.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31418.00 Da        Isoelectric Point: 7.1325

>NTDB_id=1042475 ACDZ29_RS14415 WP_375088015.1 2874007..2874804(+) (recX) [Peribacillus sp. RS7]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFQLKKGTALDDLLLGEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFAKAYVRTHVNGGNKGPTTLKLELKEKGVQEKLVVEALKEYPYDIQIEH
ARKLAGKSVKKEKNISERALRLKVEQTLLRKGFSRDVILEALEDVTVEKDEDEQWDSLCHHAEKMERRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDMD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=1042475 ACDZ29_RS14415 WP_375088015.1 2874007..2874804(+) (recX) [Peribacillus sp. RS7]
ATGCCAAACATAACAAAAATAACAACCCAAAAAAAACGTAAAGATCGTTATAACATTTTCGTTGATGAAAAATATGCTTT
CAGTGTGGACGAAGAAGTGCTATTGAAGTTTCAATTGAAAAAAGGTACGGCACTTGATGACCTGCTGCTAGGTGAAATAC
AATTCCATGATGAAATTCAAAAAGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGTTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATTATAAAGGAAGCGATACATAAGCTATACAGCTTTAACTATTT
AGACGACCTAGAATTTGCCAAGGCTTACGTACGGACCCATGTTAACGGAGGCAATAAAGGTCCCACTACCCTTAAGCTCG
AGCTTAAGGAAAAAGGGGTACAAGAAAAGTTGGTTGTCGAGGCATTGAAGGAATACCCCTATGATATTCAAATTGAACAT
GCAAGGAAACTTGCTGGAAAATCGGTCAAAAAGGAAAAAAACATTTCAGAACGGGCATTGAGGCTGAAAGTTGAACAAAC
CTTGTTACGGAAAGGTTTCTCGAGAGATGTCATCCTTGAAGCGCTTGAAGATGTGACGGTTGAAAAGGATGAAGATGAAC
AATGGGATTCTCTTTGCCACCATGCTGAAAAAATGGAACGCCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCGTTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATATGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.421

97.736

0.483

Multiple sequence alignment