Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AB9L17_RS24480 | Genome accession | NZ_CP168124 |
| Coordinates | 4738595..4741039 (-) | Length | 814 a.a. |
| NCBI ID | WP_068985712.1 | Uniprot ID | - |
| Organism | Bacillus sp. RS11 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4733595..4746039
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB9L17_RS24460 (AB9L17_24465) | ispF | 4733964..4734440 (-) | 477 | WP_068986563.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| AB9L17_RS24465 (AB9L17_24470) | ispD | 4734799..4735491 (-) | 693 | WP_068985830.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| AB9L17_RS24470 (AB9L17_24475) | - | 4735504..4736589 (-) | 1086 | WP_068985710.1 | PIN/TRAM domain-containing protein | - |
| AB9L17_RS24475 (AB9L17_24480) | radA | 4736942..4738318 (-) | 1377 | WP_068985711.1 | DNA repair protein RadA | Machinery gene |
| AB9L17_RS24480 (AB9L17_24485) | clpC | 4738595..4741039 (-) | 2445 | WP_068985712.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| AB9L17_RS24485 (AB9L17_24490) | - | 4741029..4742138 (-) | 1110 | WP_068985713.1 | protein arginine kinase | - |
| AB9L17_RS24490 (AB9L17_24495) | - | 4742135..4742683 (-) | 549 | WP_068985714.1 | UvrB/UvrC motif-containing protein | - |
| AB9L17_RS24495 (AB9L17_24500) | - | 4742697..4743167 (-) | 471 | WP_068985715.1 | CtsR family transcriptional regulator | - |
| AB9L17_RS24500 (AB9L17_24505) | - | 4743371..4743676 (-) | 306 | WP_068985716.1 | DUF4870 domain-containing protein | - |
| AB9L17_RS24505 (AB9L17_24510) | - | 4743795..4744478 (+) | 684 | WP_068985717.1 | class I SAM-dependent methyltransferase | - |
| AB9L17_RS24510 (AB9L17_24515) | corA | 4744530..4745489 (+) | 960 | WP_223553748.1 | magnesium/cobalt transporter CorA | - |
| AB9L17_RS24515 (AB9L17_24520) | - | 4745576..4745794 (-) | 219 | WP_068985719.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 90370.30 Da Isoelectric Point: 5.7009
>NTDB_id=1042433 AB9L17_RS24480 WP_068985712.1 4738595..4741039(-) (clpC) [Bacillus sp. RS11]
MMFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDISPQMIEAGIEELVGKGKEDVGPIVH
YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGIAARVLNNAGVGLNKARQQVLLLLGNNDNAQSGQQAAQAAN
TPTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKMSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFEKAASLRDTEQKLKDEIESTRKNWKEEQGKAESKVTVDDVASV
VSMWTGIPVSKIASEESSKLLQLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
EVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGADALKYQKNLGFNVGGTDTKYKDMKGTMLEELKKAFRPEFLNRIDEMIVFHSLEKVHL
KEIVSMMANSLTKRLKEQDISLELTDAALEKIAEEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEKGNQVVIDYVND
EFVVKKKEEVSTSK
MMFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDISPQMIEAGIEELVGKGKEDVGPIVH
YTPRAKKVIELSVDESRKLGHSYIGTEHLLLALIREGEGIAARVLNNAGVGLNKARQQVLLLLGNNDNAQSGQQAAQAAN
TPTLDSLARDLTQIAREGTLDPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPTVEEAILIIQGLRDRYEAHHRVKITDEAIEAAAKMSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFAVPPNLKALEDKLENVRSEKNAAVSGQEFEKAASLRDTEQKLKDEIESTRKNWKEEQGKAESKVTVDDVASV
VSMWTGIPVSKIASEESSKLLQLEEELHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
EVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGADALKYQKNLGFNVGGTDTKYKDMKGTMLEELKKAFRPEFLNRIDEMIVFHSLEKVHL
KEIVSMMANSLTKRLKEQDISLELTDAALEKIAEEGYDPQYGARPLRRALQKQVEDRLSEELLKGNVEKGNQVVIDYVND
EFVVKKKEEVSTSK
Nucleotide
Download Length: 2445 bp
>NTDB_id=1042433 AB9L17_RS24480 WP_068985712.1 4738595..4741039(-) (clpC) [Bacillus sp. RS11]
TTGATGTTTAATCGTTTTACACAACGCGCGCAAAAAGTATTACAGCTTGCACAAGAAGAGGCTATTCGTTGGAAACACGA
ATCAATTGGAACAGAGCATATTCTATTAGGGCTTATCCGTGAAGGCGGTGGTATTGCTGCAAAAGCATTAGAAGCCATTG
ATATTAGTCCTCAAATGATTGAAGCGGGTATTGAAGAGCTTGTAGGGAAAGGTAAGGAAGATGTTGGTCCAATTGTCCAC
TACACGCCTCGAGCTAAAAAAGTAATAGAACTATCGGTCGATGAATCACGTAAATTAGGTCATTCCTATATCGGAACAGA
GCATTTACTATTAGCGCTTATTCGTGAAGGTGAAGGGATAGCGGCCCGTGTATTAAACAATGCTGGTGTCGGATTAAATA
AAGCTCGTCAACAAGTGCTATTGTTATTAGGTAATAACGATAATGCTCAATCTGGTCAGCAAGCTGCACAGGCTGCCAAT
ACACCAACATTAGATAGCCTTGCGCGTGATTTAACGCAAATTGCTCGCGAAGGCACTTTAGATCCGGTCATTGGTCGAAG
CAAGGAAATCACTCGTGTTATCGAGGTATTGTCTCGCCGTACAAAAAATAACCCTGTATTAATCGGTGAGCCTGGTGTCG
GTAAAACGGCTATTGCTGAAGGTTTAGCTCAGCAAATTATTAATAATGAAGTGCCAGAAATTCTCCGTGATAAACGTGTT
ATGACTCTTGATATGGGGACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAAGATCGCTTGAAAAAAGTAATGGA
TGAAATTCGCCAAGCAGGCAATGTGATTTTATTTATCGATGAATTGCATACATTAATCGGTGCAGGTGGTGCAGAAGGTG
CCATTGATGCCTCAAATATTTTAAAACCATCTTTAGCTCGTGGTGAGCTCCAATGTATCGGTGCGACAACACTAGATGAG
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAGCGTCGTTTCCAACCGATTCAAGTTGATGAGCCAACTGTAGAAGA
AGCTATTCTAATTATTCAAGGCTTACGTGATCGTTATGAAGCACATCACCGTGTGAAAATTACAGATGAAGCAATTGAAG
CGGCAGCAAAAATGAGTGACCGATATATTTCTGATCGTTTCTTACCGGATAAGGCTATTGACTTAATCGATGAAGCGGGC
TCTAAAGTACGTTTACGTTCATTCGCAGTGCCACCAAACTTAAAGGCACTTGAAGATAAACTTGAAAATGTACGCTCTGA
AAAGAATGCAGCTGTTTCAGGTCAAGAGTTTGAAAAGGCAGCGTCATTAAGAGATACAGAGCAAAAGCTAAAAGATGAAA
TCGAATCTACGAGAAAAAATTGGAAAGAAGAGCAAGGGAAAGCTGAATCCAAAGTTACAGTGGATGATGTAGCATCGGTT
GTATCAATGTGGACTGGAATCCCAGTATCTAAAATTGCTTCTGAAGAATCTTCTAAGTTATTACAGCTTGAAGAAGAGTT
GCACAAACGTGTTGTAGGTCAAGGAGAAGCGGTAGAAGCAATCTCTCGTGCTATTCGCCGTGCAAGAGCTGGCTTAAAAG
ATCCGAAACGACCAATTGGTTCATTCATTTTCTTAGGTCCTACTGGGGTTGGTAAAACAGAGCTTGCAAGAGCATTAGCT
GAAGTGATGTTTGGCGATGAGGACGCAATGATTCGTGTTGACATGTCTGAGTACATGGAGAAACATTCGACTTCACGTTT
AGTTGGTTCACCTCCGGGTTATGTAGGCTTTGATGATGGTGGTCAGCTAACAGAAAAGGTCCGTCGCAAACCATATTCTG
TAGTATTACTAGATGAAATTGAGAAAGCTCATCCAGATGTTTTCAATATCTTACTTCAAGTACTTGAAGATGGCCGTTTA
ACAGATTCTAAAGGCCGTGTGGTAGATTTCCGCAACACAGTTGTTATTATGACATCAAACGTTGGTGCAGATGCTTTAAA
ATATCAGAAAAACCTTGGCTTCAATGTAGGTGGTACTGACACGAAGTATAAAGATATGAAGGGTACAATGTTAGAGGAAT
TGAAAAAAGCATTCCGTCCAGAGTTCTTAAACCGTATCGATGAAATGATCGTCTTCCACTCACTAGAAAAAGTACACTTA
AAAGAAATCGTATCAATGATGGCGAATTCTTTAACAAAACGTTTAAAAGAACAAGACATTTCGTTAGAGTTAACGGATGC
AGCATTAGAGAAAATTGCTGAGGAAGGCTATGATCCTCAATATGGTGCCCGTCCACTACGCCGAGCATTACAAAAACAAG
TAGAAGACCGTCTATCGGAAGAACTACTAAAAGGCAATGTAGAGAAGGGTAATCAAGTGGTCATTGATTATGTGAATGAT
GAGTTTGTTGTAAAGAAAAAAGAAGAAGTTTCTACTTCTAAATAA
TTGATGTTTAATCGTTTTACACAACGCGCGCAAAAAGTATTACAGCTTGCACAAGAAGAGGCTATTCGTTGGAAACACGA
ATCAATTGGAACAGAGCATATTCTATTAGGGCTTATCCGTGAAGGCGGTGGTATTGCTGCAAAAGCATTAGAAGCCATTG
ATATTAGTCCTCAAATGATTGAAGCGGGTATTGAAGAGCTTGTAGGGAAAGGTAAGGAAGATGTTGGTCCAATTGTCCAC
TACACGCCTCGAGCTAAAAAAGTAATAGAACTATCGGTCGATGAATCACGTAAATTAGGTCATTCCTATATCGGAACAGA
GCATTTACTATTAGCGCTTATTCGTGAAGGTGAAGGGATAGCGGCCCGTGTATTAAACAATGCTGGTGTCGGATTAAATA
AAGCTCGTCAACAAGTGCTATTGTTATTAGGTAATAACGATAATGCTCAATCTGGTCAGCAAGCTGCACAGGCTGCCAAT
ACACCAACATTAGATAGCCTTGCGCGTGATTTAACGCAAATTGCTCGCGAAGGCACTTTAGATCCGGTCATTGGTCGAAG
CAAGGAAATCACTCGTGTTATCGAGGTATTGTCTCGCCGTACAAAAAATAACCCTGTATTAATCGGTGAGCCTGGTGTCG
GTAAAACGGCTATTGCTGAAGGTTTAGCTCAGCAAATTATTAATAATGAAGTGCCAGAAATTCTCCGTGATAAACGTGTT
ATGACTCTTGATATGGGGACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAAGATCGCTTGAAAAAAGTAATGGA
TGAAATTCGCCAAGCAGGCAATGTGATTTTATTTATCGATGAATTGCATACATTAATCGGTGCAGGTGGTGCAGAAGGTG
CCATTGATGCCTCAAATATTTTAAAACCATCTTTAGCTCGTGGTGAGCTCCAATGTATCGGTGCGACAACACTAGATGAG
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAGCGTCGTTTCCAACCGATTCAAGTTGATGAGCCAACTGTAGAAGA
AGCTATTCTAATTATTCAAGGCTTACGTGATCGTTATGAAGCACATCACCGTGTGAAAATTACAGATGAAGCAATTGAAG
CGGCAGCAAAAATGAGTGACCGATATATTTCTGATCGTTTCTTACCGGATAAGGCTATTGACTTAATCGATGAAGCGGGC
TCTAAAGTACGTTTACGTTCATTCGCAGTGCCACCAAACTTAAAGGCACTTGAAGATAAACTTGAAAATGTACGCTCTGA
AAAGAATGCAGCTGTTTCAGGTCAAGAGTTTGAAAAGGCAGCGTCATTAAGAGATACAGAGCAAAAGCTAAAAGATGAAA
TCGAATCTACGAGAAAAAATTGGAAAGAAGAGCAAGGGAAAGCTGAATCCAAAGTTACAGTGGATGATGTAGCATCGGTT
GTATCAATGTGGACTGGAATCCCAGTATCTAAAATTGCTTCTGAAGAATCTTCTAAGTTATTACAGCTTGAAGAAGAGTT
GCACAAACGTGTTGTAGGTCAAGGAGAAGCGGTAGAAGCAATCTCTCGTGCTATTCGCCGTGCAAGAGCTGGCTTAAAAG
ATCCGAAACGACCAATTGGTTCATTCATTTTCTTAGGTCCTACTGGGGTTGGTAAAACAGAGCTTGCAAGAGCATTAGCT
GAAGTGATGTTTGGCGATGAGGACGCAATGATTCGTGTTGACATGTCTGAGTACATGGAGAAACATTCGACTTCACGTTT
AGTTGGTTCACCTCCGGGTTATGTAGGCTTTGATGATGGTGGTCAGCTAACAGAAAAGGTCCGTCGCAAACCATATTCTG
TAGTATTACTAGATGAAATTGAGAAAGCTCATCCAGATGTTTTCAATATCTTACTTCAAGTACTTGAAGATGGCCGTTTA
ACAGATTCTAAAGGCCGTGTGGTAGATTTCCGCAACACAGTTGTTATTATGACATCAAACGTTGGTGCAGATGCTTTAAA
ATATCAGAAAAACCTTGGCTTCAATGTAGGTGGTACTGACACGAAGTATAAAGATATGAAGGGTACAATGTTAGAGGAAT
TGAAAAAAGCATTCCGTCCAGAGTTCTTAAACCGTATCGATGAAATGATCGTCTTCCACTCACTAGAAAAAGTACACTTA
AAAGAAATCGTATCAATGATGGCGAATTCTTTAACAAAACGTTTAAAAGAACAAGACATTTCGTTAGAGTTAACGGATGC
AGCATTAGAGAAAATTGCTGAGGAAGGCTATGATCCTCAATATGGTGCCCGTCCACTACGCCGAGCATTACAAAAACAAG
TAGAAGACCGTCTATCGGAAGAACTACTAAAAGGCAATGTAGAGAAGGGTAATCAAGTGGTCATTGATTATGTGAATGAT
GAGTTTGTTGTAAAGAAAAAAGAAGAAGTTTCTACTTCTAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
78.882 |
98.894 |
0.78 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.433 |
99.386 |
0.501 |
| clpC | Streptococcus thermophilus LMD-9 |
46.411 |
100 |
0.477 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.694 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
50.767 |
88.084 |
0.447 |
| clpC | Streptococcus pneumoniae D39 |
50.767 |
88.084 |
0.447 |
| clpC | Streptococcus pneumoniae TIGR4 |
50.485 |
88.575 |
0.447 |
| clpC | Streptococcus mutans UA159 |
43.985 |
100 |
0.445 |
| clpE | Streptococcus mutans UA159 |
52.496 |
81.204 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.051 |
81.818 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
51.051 |
81.818 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
51.051 |
81.818 |
0.418 |
| clpE | Streptococcus pneumoniae R6 |
51.051 |
81.818 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.075 |
81.941 |
0.41 |