Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACCK22_RS05500 Genome accession   NZ_CP168085
Coordinates   1086569..1087555 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain CUBIST-27     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1081569..1092555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK22_RS05475 (ACCK22_05475) opp4B 1081783..1082745 (+) 963 WP_000915997.1 oligopeptide ABC transporter permease -
  ACCK22_RS05480 (ACCK22_05480) opp4C 1082757..1083638 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  ACCK22_RS05485 (ACCK22_05485) trpS 1083680..1084669 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACCK22_RS05490 (ACCK22_05490) spxA 1084963..1085358 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACCK22_RS05495 (ACCK22_05495) mecA 1085729..1086448 (+) 720 WP_001217728.1 adaptor protein MecA -
  ACCK22_RS05500 (ACCK22_05500) coiA 1086569..1087555 (+) 987 WP_000959282.1 competence protein CoiA Machinery gene
  ACCK22_RS05505 (ACCK22_05505) pepF 1087603..1089411 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ACCK22_RS05510 (ACCK22_05510) yjbH 1089871..1090677 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACCK22_RS05515 (ACCK22_05515) - 1090700..1091065 (-) 366 WP_064134835.1 truncated hemoglobin YjbI -
  ACCK22_RS05520 (ACCK22_05520) - 1091169..1091762 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  ACCK22_RS05525 (ACCK22_05525) - 1091948..1092295 (+) 348 WP_001242103.1 hypothetical protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=1041955 ACCK22_RS05500 WP_000959282.1 1086569..1087555(+) (coiA) [Staphylococcus aureus strain CUBIST-27]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1041955 ACCK22_RS05500 WP_000959282.1 1086569..1087555(+) (coiA) [Staphylococcus aureus strain CUBIST-27]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1

  coiA Staphylococcus aureus MW2

97.561

100

0.976


Multiple sequence alignment