Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KJP51_RS20675 Genome accession   NZ_OX419576
Coordinates   4021853..4022647 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis isolate NRS6105     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4016853..4027647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP51_RS20650 (NRS6105_20430) - 4017964..4018647 (-) 684 WP_024573086.1 response regulator transcription factor -
  KJP51_RS20655 (NRS6105_20435) - 4018862..4019761 (+) 900 WP_042976941.1 PepSY domain-containing protein -
  KJP51_RS20660 (NRS6105_20440) - 4019922..4020422 (+) 501 WP_069323038.1 PepSY domain-containing protein -
  KJP51_RS20665 - 4020419..4020548 (-) 130 Protein_4015 hypothetical protein -
  KJP51_RS20670 (NRS6105_20445) htrA 4020569..4021771 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  KJP51_RS20675 (NRS6105_20450) vicX 4021853..4022647 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  KJP51_RS20680 (NRS6105_20455) walI 4022669..4023511 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  KJP51_RS20685 (NRS6105_20460) walH 4023498..4024865 (-) 1368 WP_213379626.1 YycH family regulatory protein -
  KJP51_RS20690 (NRS6105_20465) walK 4024855..4026690 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  KJP51_RS20695 (NRS6105_20470) walR 4026698..4027405 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=1040992 KJP51_RS20675 WP_003226939.1 4021853..4022647(-) (vicX) [Bacillus subtilis isolate NRS6105]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1040992 KJP51_RS20675 WP_003226939.1 4021853..4022647(-) (vicX) [Bacillus subtilis isolate NRS6105]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment