Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACDW35_RS26015 | Genome accession | NZ_CP167983 |
| Coordinates | 5578636..5579160 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa strain 0102d1_7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5573636..5584160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDW35_RS25995 (ACDW35_25995) | pilR | 5574898..5576235 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACDW35_RS26000 (ACDW35_26000) | thiO | 5576281..5577375 (-) | 1095 | WP_003141551.1 | glycine oxidase ThiO | - |
| ACDW35_RS26005 (ACDW35_26005) | - | 5577515..5578015 (+) | 501 | WP_016254062.1 | GspH/FimT family pseudopilin | - |
| ACDW35_RS26010 (ACDW35_26010) | - | 5578138..5578626 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| ACDW35_RS26015 (ACDW35_26015) | pilV | 5578636..5579160 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| ACDW35_RS26020 (ACDW35_26020) | - | 5579169..5579984 (+) | 816 | WP_016254061.1 | PilW family protein | - |
| ACDW35_RS26025 (ACDW35_26025) | - | 5579981..5580586 (+) | 606 | WP_003116263.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| ACDW35_RS26030 (ACDW35_26030) | - | 5580600..5584076 (+) | 3477 | WP_003141555.1 | type IV pilus biogenesis factor PilY1 | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=1040761 ACDW35_RS26015 WP_003116261.1 5578636..5579160(+) (pilV) [Pseudomonas aeruginosa strain 0102d1_7]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=1040761 ACDW35_RS26015 WP_003116261.1 5578636..5579160(+) (pilV) [Pseudomonas aeruginosa strain 0102d1_7]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |