Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACDW34_RS01405 | Genome accession | NZ_CP167896 |
| Coordinates | 300563..301195 (+) | Length | 210 a.a. |
| NCBI ID | WP_130074426.1 | Uniprot ID | - |
| Organism | Acinetobacter piscicola strain p38 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 295563..306195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDW34_RS01395 (ACDW34_01395) | ponA | 296770..299343 (-) | 2574 | WP_372403867.1 | penicillin-binding protein PBP1a | - |
| ACDW34_RS01400 (ACDW34_01400) | pilM | 299505..300563 (+) | 1059 | WP_130074425.1 | pilus assembly protein PilM | Machinery gene |
| ACDW34_RS01405 (ACDW34_01405) | pilN | 300563..301195 (+) | 633 | WP_130074426.1 | PilN domain-containing protein | Machinery gene |
| ACDW34_RS01410 (ACDW34_01410) | - | 301192..301855 (+) | 664 | Protein_271 | type 4a pilus biogenesis protein PilO | - |
| ACDW34_RS01415 (ACDW34_01415) | pilP | 302001..302528 (+) | 528 | WP_130074428.1 | pilus assembly protein PilP | Machinery gene |
| ACDW34_RS01420 (ACDW34_01420) | pilQ | 302545..304710 (+) | 2166 | WP_372403868.1 | type IV pilus secretin PilQ | Machinery gene |
| ACDW34_RS01425 (ACDW34_01425) | aroK | 304747..305289 (+) | 543 | WP_130074430.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23499.86 Da Isoelectric Point: 5.4403
>NTDB_id=1040150 ACDW34_RS01405 WP_130074426.1 300563..301195(+) (pilN) [Acinetobacter piscicola strain p38]
MAKINLLPWREELREQRKKQFVAISIGIAVLGFIIVLLAWMYFNQRLDDQEQANQLVTSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADFLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDAEQAQAAGGAK
MAKINLLPWREELREQRKKQFVAISIGIAVLGFIIVLLAWMYFNQRLDDQEQANQLVTSTNQNLDTQLKTLDGLQEQRNA
IIERMKLIQGLQGQRPVTVRLVDELVRVVPPAMYITKFSRTGDKFTIEGKAESPNTVADFLRGLEASEWYRNAFMNSFLA
AEENKNKPATSVVPRAEESYGSFVVSVDIGEIAQAAKPDAEQAQAAGGAK
Nucleotide
Download Length: 633 bp
>NTDB_id=1040150 ACDW34_RS01405 WP_130074426.1 300563..301195(+) (pilN) [Acinetobacter piscicola strain p38]
ATGGCAAAGATTAATTTACTCCCATGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
AATCGCTGTATTGGGGTTTATCATCGTATTATTGGCTTGGATGTATTTTAATCAAAGATTAGATGATCAAGAACAAGCAA
ATCAATTGGTTACTAGCACTAATCAGAACTTGGATACGCAATTAAAAACATTAGATGGTTTGCAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAACTAATTCAAGGTTTACAAGGGCAGCGTCCTGTAACTGTGCGTTTAGTGGATGAGTTAGTTCG
TGTTGTACCACCTGCAATGTATATCACTAAATTTAGTCGGACTGGAGATAAGTTTACCATTGAAGGTAAAGCAGAAAGTC
CAAATACGGTCGCAGATTTTTTACGTGGTTTAGAAGCATCAGAATGGTATCGAAATGCCTTCATGAATTCATTCTTGGCG
GCAGAAGAAAACAAAAATAAACCAGCGACTTCGGTTGTCCCGAGAGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGTGT
GGATATCGGGGAAATTGCACAAGCGGCGAAACCTGATGCAGAACAAGCACAAGCAGCTGGAGGTGCTAAATGA
ATGGCAAAGATTAATTTACTCCCATGGCGTGAAGAACTAAGAGAACAACGAAAAAAGCAATTTGTTGCGATTAGTATTGG
AATCGCTGTATTGGGGTTTATCATCGTATTATTGGCTTGGATGTATTTTAATCAAAGATTAGATGATCAAGAACAAGCAA
ATCAATTGGTTACTAGCACTAATCAGAACTTGGATACGCAATTAAAAACATTAGATGGTTTGCAAGAACAGCGTAATGCG
ATTATTGAACGTATGAAACTAATTCAAGGTTTACAAGGGCAGCGTCCTGTAACTGTGCGTTTAGTGGATGAGTTAGTTCG
TGTTGTACCACCTGCAATGTATATCACTAAATTTAGTCGGACTGGAGATAAGTTTACCATTGAAGGTAAAGCAGAAAGTC
CAAATACGGTCGCAGATTTTTTACGTGGTTTAGAAGCATCAGAATGGTATCGAAATGCCTTCATGAATTCATTCTTGGCG
GCAGAAGAAAACAAAAATAAACCAGCGACTTCGGTTGTCCCGAGAGCTGAAGAATCTTATGGAAGTTTTGTTGTGAGTGT
GGATATCGGGGAAATTGCACAAGCGGCGAAACCTGATGCAGAACAAGCACAAGCAGCTGGAGGTGCTAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.892 |
100 |
0.719 |
| comN | Acinetobacter baylyi ADP1 |
68.72 |
100 |
0.69 |