Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | ACDK45_RS03215 | Genome accession | NZ_CP167879 |
| Coordinates | 625594..626106 (+) | Length | 170 a.a. |
| NCBI ID | WP_011272299.1 | Uniprot ID | Q4QLX0 |
| Organism | Haemophilus influenzae strain NTHi52 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 620594..631106
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDK45_RS03195 (ACDK45_03195) | nrfF | 620898..622040 (-) | 1143 | WP_005688390.1 | heme lyase NrfEFG subunit NrfF | - |
| ACDK45_RS03200 (ACDK45_03200) | - | 622037..622567 (-) | 531 | WP_005688388.1 | DsbE family thiol:disulfide interchange protein | - |
| ACDK45_RS03205 (ACDK45_03205) | nrfE | 622567..624473 (-) | 1907 | Protein_602 | heme lyase NrfEFG subunit NrfE | - |
| ACDK45_RS03210 (ACDK45_03210) | suhB | 624582..625394 (-) | 813 | WP_011272298.1 | inositol-1-monophosphatase | - |
| ACDK45_RS03215 (ACDK45_03215) | comN | 625594..626106 (+) | 513 | WP_011272299.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACDK45_RS03220 (ACDK45_03220) | comO | 626106..626825 (+) | 720 | WP_011272300.1 | type II secretion system protein J | Machinery gene |
| ACDK45_RS03225 (ACDK45_03225) | comP | 626822..627505 (+) | 684 | WP_011272301.1 | DUF2572 family protein | Machinery gene |
| ACDK45_RS03230 (ACDK45_03230) | comQ | 627498..627785 (+) | 288 | WP_021034778.1 | DUF5374 domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19874.13 Da Isoelectric Point: 8.7271
>NTDB_id=1040083 ACDK45_RS03215 WP_011272299.1 625594..626106(+) (comN) [Haemophilus influenzae strain NTHi52]
MQKGVTLVELLIGLAIISIVLSFVVPLWQTDSPKTILAKEQHRLYLFLRQIQVRAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGVTLVELLIGLAIISIVLSFVVPLWQTDSPKTILAKEQHRLYLFLRQIQVRAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=1040083 ACDK45_RS03215 WP_011272299.1 625594..626106(+) (comN) [Haemophilus influenzae strain NTHi52]
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGATTAGCAATCATCAGCATTGTGCTGAGTTTTGTCGTGCCATT
ATGGCAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCTTGTATTTATTTCTACGACAAATTCAGGTTC
GTGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGGAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGATTAGCAATCATCAGCATTGTGCTGAGTTTTGTCGTGCCATT
ATGGCAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCTTGTATTTATTTCTACGACAAATTCAGGTTC
GTGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGGAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
95.882 |
100 |
0.959 |