Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | QUF32_RS13235 | Genome accession | NZ_AP028128 |
| Coordinates | 2816104..2816721 (+) | Length | 205 a.a. |
| NCBI ID | WP_024374317.1 | Uniprot ID | M1KD28 |
| Organism | Vibrio fluvialis strain IDH05335 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2811104..2821721
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUF32_RS13210 (KKIDH5335_25340) | panC | 2811563..2812444 (+) | 882 | WP_020331996.1 | pantoate--beta-alanine ligase | - |
| QUF32_RS13215 (KKIDH5335_25350) | - | 2812502..2813272 (-) | 771 | WP_020331995.1 | ABC transporter permease | - |
| QUF32_RS13220 (KKIDH5335_25360) | - | 2813277..2814194 (-) | 918 | WP_143683170.1 | ABC transporter ATP-binding protein | - |
| QUF32_RS13225 (KKIDH5335_25370) | can | 2814538..2815206 (+) | 669 | WP_020331992.1 | carbonate dehydratase | - |
| QUF32_RS13230 (KKIDH5335_25380) | hpt | 2815256..2815783 (-) | 528 | WP_020331991.1 | hypoxanthine phosphoribosyltransferase | - |
| QUF32_RS13235 (KKIDH5335_25390) | opaR | 2816104..2816721 (+) | 618 | WP_024374317.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| QUF32_RS13240 (KKIDH5335_25400) | lpdA | 2816843..2818270 (-) | 1428 | WP_020331989.1 | dihydrolipoyl dehydrogenase | - |
| QUF32_RS13245 (KKIDH5335_25410) | aceF | 2818529..2820424 (-) | 1896 | WP_143683921.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23890.30 Da Isoelectric Point: 6.2346
>NTDB_id=103948 QUF32_RS13235 WP_024374317.1 2816104..2816721(+) (opaR) [Vibrio fluvialis strain IDH05335]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
Nucleotide
Download Length: 618 bp
>NTDB_id=103948 QUF32_RS13235 WP_024374317.1 2816104..2816721(+) (opaR) [Vibrio fluvialis strain IDH05335]
ATGGACGCATCTATAGAGAAACGCCCTAGAACACGGCTATCTCCTCAAAAGCGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTTCTC
ACCGACAACATCGATCTCGATATTCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTATCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCCAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGACATGCTGTGCATCTATAAACGCGATCACTAA
ATGGACGCATCTATAGAGAAACGCCCTAGAACACGGCTATCTCCTCAAAAGCGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTTCTC
ACCGACAACATCGATCTCGATATTCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTATCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCCAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGACATGCTGTGCATCTATAAACGCGATCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.188 |
98.537 |
0.8 |
| hapR | Vibrio cholerae C6706 |
78.713 |
98.537 |
0.776 |
| hapR | Vibrio cholerae strain A1552 |
78.713 |
98.537 |
0.776 |